Gene
| Gene Model ID | pfu_aug1.0_411.1_00293 |
|---|---|
| Locus | scaffold411.1 : 16375 ... 20885 : - |
| To GenomeBrowser | scaffold411.1:16375..20885 |
| Genes list of scaffold | scaffold411.1 |
| Synonym | pfu_aug2.0_7.1_23223 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | shematrin-7 |
| Description | reciprocal BLASTN hit to NCBI Accession AB244425 |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_411.1_00293.t1 | gi|93102311|dbj|BAE93439.1| | shematrin-7 [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 1 |
| >Adult tissues | |
| mantle | 2 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_411.1_00293.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_411.1_00293.t1 atgtctcccctcctatgcgtcccccttttcatcgctattgccagcgccaagttttatccacgcccagagccttacaattt ggcagcatccggtagtttgggaggagtaagtccctctatcggaagtcttggagccggaagtttgtcatctctcggtggag cagccccacttggtggagcaggatcagttggacttggtgcaggatcagttggacttggtgcagccccagttgctgaacca gcaccattttacggaccatcagtaaacctcgggggatccggacttggaggagctggttccgtgctcagcggtgctggtcc aatgttgggcggtgctggtctcgtcccaggaggtgcaggttccgttctaggaggtgctggttccgttcttggaggcggta gtggcttaggagttggaagagatagagctgttttccatggacgaactgttggaaacagagtatcaggcagaattttctca aggggtcaggttattccttatggaggatacctcggtctgtccagaggatatggaggtatctatgggggaaacctgtacgg tggatcgagtggtttgggaggacttgggggacttagcggcatgggcagccttggaggacttagtggagttggaggtctgt acggcggaccctatagtagtggaggtctgtatggaggattaagaagagtaggaggtctcggtggagtaagtggacttggt ggaatgggtggacttggaggaatgggtggacttggcggaggtagtggacttggaggaatgggtggacttggaggaatggg tggacttggcggaggtagtggacttggaggaatgggtggacttggaggaggtagtggacttggacttggtggtatgggag gattaggaggactcggcagtgttggaggcggatcactcggtgttagtggtataggtggaattggaatccctcggccagaa tacagaccaaggaagaaatactag |
|
Protein
| Protein ID | pfu_aug1.0_411.1_00293.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_411.1_00293.t1 MSPLLCVPLFIAIASAKFYPRPEPYNLAASGSLGGVSPSIGSLGAGSLSSLGGAAPLGGAGSVGLGAGSVGLGAAPVAEP APFYGPSVNLGGSGLGGAGSVLSGAGPMLGGAGLVPGGAGSVLGGAGSVLGGGSGLGVGRDRAVFHGRTVGNRVSGRIFS RGQVIPYGGYLGLSRGYGGIYGGNLYGGSSGLGGLGGLSGMGSLGGLSGVGGLYGGPYSSGGLYGGLRRVGGLGGVSGLG GMGGLGGMGGLGGGSGLGGMGGLGGMGGLGGGSGLGGMGGLGGGSGLGLGGMGGLGGLGSVGGGSLGVSGIGGIGIPRPE YRPRKKY |
|