Gene
| Gene Model ID | pfu_aug1.0_4112.1_52185 |
|---|---|
| Locus | scaffold4112.1 : 8108 ... 10705 : - |
| To GenomeBrowser | scaffold4112.1:8108..10705 |
| Genes list of scaffold | scaffold4112.1 |
| Synonym | pfu_aug2.0_164.1_13709 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4112.1_52185.t1 | 1 | 1 | Gal-3-0_sulfotr | 1 | 194 | 1.1e-24 | 86.9 | 1.9e-28 | 1.4e-24 | 86.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4112.1_52185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4112.1_52185.t1 atgtattttggaatcctgcgtgagccatactcacagtttgtttccactctgcattattttcgaccaccttatatatttga tatagaagacgatgatccgatctctgtttatttgaacgatccgagtaagtatgaaatagaggtgaaatattcttcgacaa ataaccgacaagctttcgaatttggattcccattggatatattcaaaacacgtgacatgacgcgagtgagtgaatactta aggaaattggacaccgagttcaaacttgttttaatcgcggaatatttaccagagtccgttattttaatgaagagatatct gaactggacaacaaaggatgttatatacattttgaagaatgcatggtctcaactgcccgaaactaatcaggcagctttaa atatacgattccatgtcagcaatgccactcgaacactctacaaggcatgggccaccttagactacgcgctgtatgattac ttcgtacaaaaacttcgtaagcaaattttagcagaggggtccgattttcgatcagaagtttcgaatttcaagtctatttt agggaaaatcgaacacttctgtaataaagtgagtagaccttaccgctttgtgaaactacacatagaccaaacaagatgga atgatcttatagtttatacgacaacagattgtagtcagctattattgccagagaaagacttccatgatgagatacgtaat gtacaatatccaaacaaaacattgggcagaccgtctaagtga |
|
Protein
| Protein ID | pfu_aug1.0_4112.1_52185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4112.1_52185.t1 MYFGILREPYSQFVSTLHYFRPPYIFDIEDDDPISVYLNDPSKYEIEVKYSSTNNRQAFEFGFPLDIFKTRDMTRVSEYL RKLDTEFKLVLIAEYLPESVILMKRYLNWTTKDVIYILKNAWSQLPETNQAALNIRFHVSNATRTLYKAWATLDYALYDY FVQKLRKQILAEGSDFRSEVSNFKSILGKIEHFCNKVSRPYRFVKLHIDQTRWNDLIVYTTTDCSQLLLPEKDFHDEIRN VQYPNKTLGRPSK |
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