Gene
| Gene Model ID | pfu_aug1.0_41189.1_63065 |
|---|---|
| Locus | scaffold41189.1 : 4126 ... 14359 : + |
| To GenomeBrowser | scaffold41189.1:4126..14359 |
| Genes list of scaffold | scaffold41189.1 |
| Synonym | pfu_aug2.0_59.1_30103 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_41189.1_63065.t1 | 1 | 1 | HECT | 219 | 372 | 5.2e-08 | 32.4 | 4.9e-12 | 7.3e-08 | 31.9 |
Transcript
| Transcript ID | pfu_aug1.0_41189.1_63065.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41189.1_63065.t1 atgctcaatttggtgctctattgctatcattacacgacaactaccgttgggtcgccagtggccgtaacaacagccgagga caacagaaccaatttggtagtggggctagttattagcggtctgcgcaatttgacgaaatctctgagtcacattcaacagc aagtagaaataacacgggaaaacttagtggacaatctcctgaatatttactctgatccgtgtatcgtggagggaagtctt catataaagatcataggggaggagggatctgattgggggggagtgtcacgtgatgtcttcacatcgttctggagcgaagt gtcgttaacatattttctgggtgacctagtccatgtgccttacctcccaccacatcgacttgaggaaatgtacaagtttc gattgatggggagaattctgtctcacagtacggctgtactcggctacatcccaatggccatatgtaaaagtaccatgatg gtgacgataatagacgcgacagaaattgcagaagatgtattattagaggactttttattatatttggacaaggaagacag aactttattacaaagtgctatggatcatttccaggacctttccgaggacgaattagacaaagttcaaaatatattcgtta agtttgacatgggttgtgtactacaggaagagacattacataaacagatactgaaaatggcacaaaacgagctagtcatc aaaccccgctcgctgtgtgaaaaaatgcgtgaaggcattccggaagtccattatgctcaattctggtcacaaatgagtct ggatcacttaactgttttgtacgatcgtttaaaaccgacaccaaataaagtgctagcctgtctgagatctgagacccttt ttctcaccgagtctcggaggcgagtgtacggatacttcaaagactttatcagaacgctaacagagcgggaactcgagatt ctgctacagttcattacgggccaagcttgtgtgccaaagagattaataacagtacaattctctcaactttcaggtgcgga aagacgacccattgctcacacatgtagcttctctatcgaacttcccgaaacgtatgaaaattacgaagattttgatgcgg aattcagaatccttttaacctccgatatattaaggttcgatacacagtaa |
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Protein
| Protein ID | pfu_aug1.0_41189.1_63065.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41189.1_63065.t1 MLNLVLYCYHYTTTTVGSPVAVTTAEDNRTNLVVGLVISGLRNLTKSLSHIQQQVEITRENLVDNLLNIYSDPCIVEGSL HIKIIGEEGSDWGGVSRDVFTSFWSEVSLTYFLGDLVHVPYLPPHRLEEMYKFRLMGRILSHSTAVLGYIPMAICKSTMM VTIIDATEIAEDVLLEDFLLYLDKEDRTLLQSAMDHFQDLSEDELDKVQNIFVKFDMGCVLQEETLHKQILKMAQNELVI KPRSLCEKMREGIPEVHYAQFWSQMSLDHLTVLYDRLKPTPNKVLACLRSETLFLTESRRRVYGYFKDFIRTLTERELEI LLQFITGQACVPKRLITVQFSQLSGAERRPIAHTCSFSIELPETYENYEDFDAEFRILLTSDILRFDTQ |
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