Gene
| Gene Model ID | pfu_aug1.0_4120.1_01628 |
|---|---|
| Locus | scaffold4120.1 : 13466 ... 25947 : + |
| To GenomeBrowser | scaffold4120.1:13466..25947 |
| Genes list of scaffold | scaffold4120.1 |
| Synonym | pfu_aug2.0_1565.1_18409 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4120.1_01628.t1 | 1 | 1 | RNA_helicase | 197 | 276 | 2.4e-06 | 27.6 | 1.0e-09 | 5.1e-06 | 26.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4120.1_01628.t1 | gi|81984152|sp|O39828.1|REP2_FBNY2 | 2.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4120.1_01628.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4120.1_01628.t1 atgtggacaaagaaggcaaagaaaaaagacggcaaaggaaagaacttcatgctgactttccaatccacttgcaagtacga actccaacggtacttccagaataagggtggagagacgtggatgagagcgttagctgccggtaatgagtggggaagcggat tcaacgagctaggccatacccatgccgtaatccagaccaaaacagagatgacgttcaaggaatttaggctgaaatggaag ggtccaaatataggggacatccagagatgccaaaatgtgaaggattctgtgcgttacgtcaccaaagaggatccacggag cttatgtttccattttgataaagactggacaagcttgctagtgaaggcctacatttatgcacagaagagctccaaattgg ttccaacatcctatccgtactgctccctgccgcctttccagcaaaggcaattccgtgatatgtggactcagttccgggca gaggagcaggacgctaggcaatgttggaccaatgaggagctcgaactgcgaccatggcaacggcaggtcagacgtcagat actgcaacaagacgataggacggtactgtggatacatgacgaggtgggaggccatggcaagagcacacttgcaaagtata tgatgggcgaaggagcaatgtacgccaccaacagctcgacagtgaatttcgcctatgcctacaacgaggagaaggtggtt atatttgactttgtgcgtgacgacagagaccatattaactacgggattctagaatgcctcaagaatggtatgatgttctc tgccaaatatgaaagtagggtaaagaggttcacaccagccaaggttgcagtttttgccaatttcgcccctgactacgaga agttgtcagcagacagatgaaggcgaaatgttacgttagcaacgtcaaagactagtataactgccgtaactaagcagcaa acaaccaatgatattcgacgttataacgacattgcattagaataa |
|
Protein
| Protein ID | pfu_aug1.0_4120.1_01628.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4120.1_01628.t1 MWTKKAKKKDGKGKNFMLTFQSTCKYELQRYFQNKGGETWMRALAAGNEWGSGFNELGHTHAVIQTKTEMTFKEFRLKWK GPNIGDIQRCQNVKDSVRYVTKEDPRSLCFHFDKDWTSLLVKAYIYAQKSSKLVPTSYPYCSLPPFQQRQFRDMWTQFRA EEQDARQCWTNEELELRPWQRQVRRQILQQDDRTVLWIHDEVGGHGKSTLAKYMMGEGAMYATNSSTVNFAYAYNEEKVV IFDFVRDDRDHINYGILECLKNGMMFSAKYESRVKRFTPAKVAVFANFAPDYEKLSADRXRRNVTLATSKTSITAVTKQQ TTNDIRRYNDIALE |
|