Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_41253.1_05172
Locus scaffold41253.1 : 1 ... 4998 : -
To GenomeBrowser scaffold41253.1:1..4998
Genes list of scaffold scaffold41253.1
Synonym pfu_aug2.0_797.1_24414

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_41253.1_05172.t1 gi|156377213|ref|XP_001630751.1| predicted protein [Nematostella vectensis] 5.0e-29

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues
maleGonad 2

Transcript
Transcript IDpfu_aug1.0_41253.1_05172.t1
Definition-
>pfu_aug1.0_41253.1_05172.t1
atgtccatggttttaagtatccatattaaccatttttgtgttcctcttgcatgggtagaaaagcaggaaaagtcagatgt
ggagactaaggcagccagaggactttacaatcctatacttgagacagagagcacctttgtcaaggatgtagatagtttcc
ttacccataaagaaatacttgacctgaggaagaaagaacttctacataagaaatggaacgagagagtgtatgaacctctg
aggaggaaaatcatcgaggcgatggacagtgatgattggccggagctggacaggaggaaaagagagcttcacagacaata
tctggagtttgttaaccaaaagggtcatgtattccttgaaactatggaccccagtgagtactatgcccaggctcttaacg
gacatagacccgccccaatcaagcattcttgtttaaaatggagtaagcatatggcggaagctaagcgccattttgaccat
cagcattataaggactctagatcaactctcagttga

Protein
Protein IDpfu_aug1.0_41253.1_05172.t1
Definition-
>pfu_aug1.0_41253.1_05172.t1
MSMVLSIHINHFCVPLAWVEKQEKSDVETKAARGLYNPILETESTFVKDVDSFLTHKEILDLRKKELLHKKWNERVYEPL
RRKIIEAMDSDDWPELDRRKRELHRQYLEFVNQKGHVFLETMDPSEYYAQALNGHRPAPIKHSCLKWSKHMAEAKRHFDH
QHYKDSRSTLS

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