Gene
Gene Model ID | pfu_aug1.0_4136.1_23507 |
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Locus | scaffold4136.1 : 25380 ... 42485 : - |
To GenomeBrowser | scaffold4136.1:25380..42485 |
Genes list of scaffold | scaffold4136.1 |
Synonym | pfu_aug2.0_229.1_30470 |
Manual annotation
Study field | Metabolism |
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Gene name | Bardet-Biedl syndrome 7 |
Description | Best match to "PREDICTED: Strongylocentrotus purpuratus similar to Bardet-Biedl syndrome 7 (LOC586040)".BLAST hits to various BBS7 genes. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4136.1_23507.t1 | gi|115770372|ref|XP_790931.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_4136.1_23507.t1 |
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Definition | - |
>pfu_aug1.0_4136.1_23507.t1 atgtataatattatccatcaggatgcagagttactgtatgaggtggaggtaccaggacctcctgttgtcatgcagctcta tgataaaactggaggagatgaaggtgatgagatattatacggtacatcagacgggagagtaggtctggtacagattggaa attcattaatatttttacagagtgatgtacctatagacctgttagatgtagaaaagaattctgcagtggtcagttatagt gcatgtaacccagaggagggtaatttcctactagctacctatagatgccaagccaacacgactcgtttagagcttaaaat acgatcaatcgagggtcagtatggaacactacaggcttacgtcactccgagagtccagccaaagacatgccaagtcatac agtatcagatcaaacccctctcactacatcagaggacacatgtatttgatgatgccaggcctttgaataccattaagctc tctggagccttcagtttggcagagatgcactcctgggtctgtttctgtttacctgagcttcccgagagaacgccccctgg tgaccttataacgttccattttgtctctacattccttgatactcaactggaatgtctgtatagatacatgtactatttgg attttctccatacattattgttgaatatgataaatacatgtgactatagagcatcttacttttag |
Protein
Protein ID | pfu_aug1.0_4136.1_23507.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4136.1_23507.t1 MYNIIHQDAELLYEVEVPGPPVVMQLYDKTGGDEGDEILYGTSDGRVGLVQIGNSLIFLQSDVPIDLLDVEKNSAVVSYS ACNPEEGNFLLATYRCQANTTRLELKIRSIEGQYGTLQAYVTPRVQPKTCQVIQYQIKPLSLHQRTHVFDDARPLNTIKL SGAFSLAEMHSWVCFCLPELPERTPPGDLITFHFVSTFLDTQLECLYRYMYYLDFLHTLLLNMINTCDYRASYF |