Gene
| Gene Model ID | pfu_aug1.0_4136.1_23507 |
|---|---|
| Locus | scaffold4136.1 : 25380 ... 42485 : - |
| To GenomeBrowser | scaffold4136.1:25380..42485 |
| Genes list of scaffold | scaffold4136.1 |
| Synonym | pfu_aug2.0_229.1_30470 |
Manual annotation
| Study field | Metabolism |
|---|---|
| Gene name | Bardet-Biedl syndrome 7 |
| Description | Best match to "PREDICTED: Strongylocentrotus purpuratus similar to Bardet-Biedl syndrome 7 (LOC586040)".BLAST hits to various BBS7 genes. |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4136.1_23507.t1 | gi|115770372|ref|XP_790931.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4136.1_23507.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4136.1_23507.t1 atgtataatattatccatcaggatgcagagttactgtatgaggtggaggtaccaggacctcctgttgtcatgcagctcta tgataaaactggaggagatgaaggtgatgagatattatacggtacatcagacgggagagtaggtctggtacagattggaa attcattaatatttttacagagtgatgtacctatagacctgttagatgtagaaaagaattctgcagtggtcagttatagt gcatgtaacccagaggagggtaatttcctactagctacctatagatgccaagccaacacgactcgtttagagcttaaaat acgatcaatcgagggtcagtatggaacactacaggcttacgtcactccgagagtccagccaaagacatgccaagtcatac agtatcagatcaaacccctctcactacatcagaggacacatgtatttgatgatgccaggcctttgaataccattaagctc tctggagccttcagtttggcagagatgcactcctgggtctgtttctgtttacctgagcttcccgagagaacgccccctgg tgaccttataacgttccattttgtctctacattccttgatactcaactggaatgtctgtatagatacatgtactatttgg attttctccatacattattgttgaatatgataaatacatgtgactatagagcatcttacttttag |
|
Protein
| Protein ID | pfu_aug1.0_4136.1_23507.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4136.1_23507.t1 MYNIIHQDAELLYEVEVPGPPVVMQLYDKTGGDEGDEILYGTSDGRVGLVQIGNSLIFLQSDVPIDLLDVEKNSAVVSYS ACNPEEGNFLLATYRCQANTTRLELKIRSIEGQYGTLQAYVTPRVQPKTCQVIQYQIKPLSLHQRTHVFDDARPLNTIKL SGAFSLAEMHSWVCFCLPELPERTPPGDLITFHFVSTFLDTQLECLYRYMYYLDFLHTLLLNMINTCDYRASYF |
|