Gene
| Gene Model ID | pfu_aug1.0_41385.1_48448 |
|---|---|
| Locus | scaffold41385.1 : 1 ... 17876 : + |
| To GenomeBrowser | scaffold41385.1:1..17876 |
| Genes list of scaffold | scaffold41385.1 |
| Synonym | pfu_aug2.0_1994.1_15343 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_41385.1_48448.t1 | 1 | 1 | Sec6 | 1 | 140 | 1.2e-31 | 109.4 | 1.8e-35 | 1.4e-31 | 109.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_41385.1_48448.t1 | gi|54020886|ref|NP_001005685.1| | exocyst complex component 3 [Xenopus (Silurana) tropicalis] | 5.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_41385.1_48448.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41385.1_48448.t1 cttagggaattgatatcaaatggacttgaagggaacgagatggttactttacttcagtgggtaggaatctattattcacc agagctgatgaagaacccagcattggactttgatactaaggagttgggacctttgctggagaacaatgaaatcgatgaac tacaaaacctatacttgaaaaatatgaggcataatgtaatggaatggactaaaaactcgttaacacaagatcagaaggac tggcataggaacgagcatccggatgctgacggagacgggtattattctacgtcgttacccgttattatattccagatgat ggaacaaaatcttcaagttgcccagatgattggagaggatttagtgaagaaagttctcgaattgtttgcagatgaactca acttatttgccaaagattttgaaa |
|
Protein
| Protein ID | pfu_aug1.0_41385.1_48448.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41385.1_48448.t1 LRELISNGLEGNEMVTLLQWVGIYYSPELMKNPALDFDTKELGPLLENNEIDELQNLYLKNMRHNVMEWTKNSLTQDQKD WHRNEHPDADGDGYYSTSLPVIIFQMMEQNLQVAQMIGEDLVKKVLELFADELNLFAKDFE |
|