Gene
| Gene Model ID | pfu_aug1.0_414.1_22173 |
|---|---|
| Locus | scaffold414.1 : 16398 ... 22765 : - |
| To GenomeBrowser | scaffold414.1:16398..22765 |
| Genes list of scaffold | scaffold414.1 |
| Synonym | pfu_aug2.0_1237.1_24797 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_414.1_22173.t1 | 1 | 1 | Tim17 | 70 | 192 | 2.1e-29 | 102.1 | 1.7e-33 | 2.6e-29 | 101.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_414.1_22173.t1 | gi|256077875|ref|XP_002575225.1| | 4.00001e-40 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_414.1_22173.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_414.1_22173.t1 atgtggagtgatctagcgaagctttctcaggaaaataaagaaaaagaatttccgaaactgacagaaaaagatgttgaaag ctttagcttcgttgttgacaatgtaatcggttacaaaaaagagcgaagagctgcattcatcccacttggtggaatacccc agataccaaggtccagagaagaaatccttatttcatctttctttgaaagttgtacatttaaagccactgcagcttgtgtt gttggatttgcccttgggggagcgttcggactgtttacagcaggagttgatcccatgtccacaatgtcaacggaaacacc taccaccaaaatggttctccaggagatgaaaactcgttttaaatcttacgggaaaaattttgctttggttggatgcatgt ttgctggaacagaatgcttacttgaaacatatcgaggtaaaacagagatggggaatggtacaatcacaggtggacttgtt ggaggtgtcctaggacttagagctggtttgagagccggtgtttacggagccattggatttgctgcattctcaactgccat tgactactatttaagacactga |
|
Protein
| Protein ID | pfu_aug1.0_414.1_22173.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_414.1_22173.t1 MWSDLAKLSQENKEKEFPKLTEKDVESFSFVVDNVIGYKKERRAAFIPLGGIPQIPRSREEILISSFFESCTFKATAACV VGFALGGAFGLFTAGVDPMSTMSTETPTTKMVLQEMKTRFKSYGKNFALVGCMFAGTECLLETYRGKTEMGNGTITGGLV GGVLGLRAGLRAGVYGAIGFAAFSTAIDYYLRH |
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