Gene
| Gene Model ID | pfu_aug1.0_414.1_22179 |
|---|---|
| Locus | scaffold414.1 : 70496 ... 81225 : + |
| To GenomeBrowser | scaffold414.1:70496..81225 |
| Genes list of scaffold | scaffold414.1 |
| Synonym | pfu_aug2.0_2903.1_12310 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_414.1_22179.t1 | 1 | 1 | CPSase_L_D2 | 3 | 143 | 0.0 | 179.3 | 0.0 | 0.0 | 179.0 |
| pfu_aug1.0_414.1_22179.t1 | 1 | 1 | ATP-grasp_4 | 3 | 122 | 5.8e-07 | 29.4 | 7.3e-10 | 8.3e-07 | 28.9 |
| pfu_aug1.0_414.1_22179.t1 | 1 | 1 | Dala_Dala_lig_C | 29 | 120 | 2.5e-06 | 27.0 | 6.0e-09 | 6.9e-06 | 25.5 |
| pfu_aug1.0_414.1_22179.t1 | 1 | 1 | Biotin_lipoyl_2 | 146 | 179 | 4.6e-06 | 26.2 | 9.1e-09 | 1.0e-05 | 25.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_414.1_22179.t1 | gi|260796501|ref|XP_002593243.1| | hypothetical protein BRAFLDRAFT_124863 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_414.1_22179.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_414.1_22179.t1 atgtcagaggatgagtttgagagtcagttagagtcagctaaaaccgagggcttgaaatcatttggtgatgacatcatgtt attggaaaaatttgtacaaacacccaggcacgtagaggtacaagtgtttggtgaccagcacggtaattatgtatatctgt ttgagagggactgcagtgtacagagacgacatcaaaaaatcatagaggaggctccagcaccgggtttgtctgatgaggtc cgtagatcgataggagaggctgcagttaaagctgctaaggctgtaaattatgtaggggcagggacagtagaatttatcat ggataaagatcagaagttttactttatggagatgaacacacgacttcaagtggaacatcctgtaacagagatgattacag acacagatctcgtggaatggcagctcaggtatgtgataagagctccacatgatggtgtgatagagaaagtcttctacaag tcaggggataccgtgtctaagggaactgtgcttgtacatttcacagagaataaaactgatccagaggcaacgtccaactc agattga |
|
Protein
| Protein ID | pfu_aug1.0_414.1_22179.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_414.1_22179.t1 MSEDEFESQLESAKTEGLKSFGDDIMLLEKFVQTPRHVEVQVFGDQHGNYVYLFERDCSVQRRHQKIIEEAPAPGLSDEV RRSIGEAAVKAAKAVNYVGAGTVEFIMDKDQKFYFMEMNTRLQVEHPVTEMITDTDLVEWQLRYVIRAPHDGVIEKVFYK SGDTVSKGTVLVHFTENKTDPEATSNSD |
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