Gene
| Gene Model ID | pfu_aug1.0_414.1_22180 |
|---|---|
| Locus | scaffold414.1 : 82410 ... 104463 : - |
| To GenomeBrowser | scaffold414.1:82410..104463 |
| Genes list of scaffold | scaffold414.1 |
| Synonym | pfu_aug2.0_2903.1_12309 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_414.1_22180.t1 | 1 | 1 | XPA_N | 96 | 124 | 1.0e-11 | 44.2 | 5.9e-15 | 2.2e-11 | 43.2 |
| pfu_aug1.0_414.1_22180.t1 | 1 | 1 | XPA_C | 142 | 190 | 1.0e-19 | 69.8 | 5.4e-23 | 2.0e-19 | 68.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_414.1_22180.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_414.1_22180.t1 aaatggcatcaaatgaagtagatgcagaagacaggaaacttacggctgctcagcgcgcagcaatagaacgtaatagacag aaagccctgcttgtacgggaagccaaacaaaaacgcaagctgtttgaagctgaaaaaatagagacaagagtgaagttgac aaaaacagtagacacaggagcaggatttttcttggaagaagaagatgacaaagagacgaaaggtcaactgaaagtagtac acccacttggtccgttggagccggtaacatcatcaggagacgttgtagatgatacaatatgtgataactgtgggaaagaa ttcatggattcctacctcttctcacattttgatgctctcatctgtgataattgcaaccgatttccatattttttatcttt gtaccaaagagaagaagacaaccctctcataacaaggacagatgccaagaataaatatttattaaaagatgctgattttg ataagcgggatccaaaactgaaattcattgttcgtaggaatccccacaatcctcgatggggagatatgaaactttactat gaacctcagatatatgacagagctatggaggtatggggaagtgaagagggactggaggaggccaaggacaagcgcaccga aaatcgggaaaaatccaaacagaaaaagtttgacaaaaaagttaaagggagttttttaaccacaaaatacatgtacatgt atatacttcgaaggggaaactttagacttttcaattgtaaattagaccttgaaagatttatcatgaaaaatgtacctgta aatcctaaatataaaaaataccgtattctttccaataagctagaacgagttcaaatagtgatgaaccagaaaaacgagga gctggaggaggagaggagggcaagagaggcggcggagaagacgtgtgaaaccttaaaaatgacgatagataaactagagg agtacttaaggaagaaacacacctcagctgagactagcctcctggcacctacagacataagcgggtaa |
|
Protein
| Protein ID | pfu_aug1.0_414.1_22180.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_414.1_22180.t1 MASNEVDAEDRKLTAAQRAAIERNRQKALLVREAKQKRKLFEAEKIETRVKLTKTVDTGAGFFLEEEDDKETKGQLKVVH PLGPLEPVTSSGDVVDDTICDNCGKEFMDSYLFSHFDALICDNCNRFPYFLSLYQREEDNPLITRTDAKNKYLLKDADFD KRDPKLKFIVRRNPHNPRWGDMKLYYEPQIYDRAMEVWGSEEGLEEAKDKRTENREKSKQKKFDKKVKGSFLTTKYMYMY ILRRGNFRLFNCKLDLERFIMKNVPVNPKYKKYRILSNKLERVQIVMNQKNEELEEERRAREAAEKTCETLKMTIDKLEE YLRKKHTSAETSLLAPTDISG |
|