Gene
| Gene Model ID | pfu_aug1.0_4140.1_59443 |
|---|---|
| Locus | scaffold4140.1 : 22496 ... 30122 : + |
| To GenomeBrowser | scaffold4140.1:22496..30122 |
| Genes list of scaffold | scaffold4140.1 |
| Synonym | pfu_aug2.0_46.1_20119 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4140.1_59443.t1 | 1 | 1 | 2-Hacid_dh_C | 116 | 293 | 0.0 | 156.6 | 0.0 | 0.0 | 156.1 |
| pfu_aug1.0_4140.1_59443.t1 | 1 | 1 | NAD_binding_2 | 153 | 258 | 8.2e-07 | 29.0 | 4.4e-10 | 1.6e-06 | 28.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4140.1_59443.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4140.1_59443.t1 atgacaggccgggtaccatgtattttcctcgctagcagagtacctagattataccaggcaacaaggaatatactaccgtc ttatgaatttaatgaagttaagatagacaatgaaggaaagataaccgatgcagacaaggcagttttactagaaaaagccg aaatcttatttgctgacctccctgttatcaatgaaatagtagggaaggcacccaaactgaaatgggcacaaagcacatgg gcgggagtggaaacgattataaaaagtttacctcagcctccagatggcgtgacaatcacccgaatgggagacggatttgg ttcattgatggcagaatatgtgcttggccaaataatcagccgagaaagattttttaccgttatggtggaggctcaaaagc aaagtgtctgggacaaatctaaagtaatcaatataagaccattgtcaagtctaacggcagggattcttggtgtcggccaa ataggaacggaaatcgctcggcttttacgttctgttgggatgacaacatggggtttgggacgcaatgaaagaaaacataa acctccagaattcaatgttgtcaagacaaccaacgacatgacagaatttttacagagctgtgactatttaataaatgtct taccaagtactgcttccaccaaaaatctactctctggagaaactctaaaacaatgcaacaaaagtccgtgctttataaat gtagggagaggagatatcattgatgacgggtcccttttaaaagctttaaaaaatgattggttgagtggtgctattttgga tgtggtcaaccaggagccactacctcaagacagtcctttatggtctacaccaaatgttgttataactccacatatatcag ggccgtgcttggcagagccgatagcggatgtcttcgcaagaaatctgtccaactacctcgaaggaaagccactagactac gagatcaaatgggatgtcgggtattga |
|
Protein
| Protein ID | pfu_aug1.0_4140.1_59443.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4140.1_59443.t1 MTGRVPCIFLASRVPRLYQATRNILPSYEFNEVKIDNEGKITDADKAVLLEKAEILFADLPVINEIVGKAPKLKWAQSTW AGVETIIKSLPQPPDGVTITRMGDGFGSLMAEYVLGQIISRERFFTVMVEAQKQSVWDKSKVINIRPLSSLTAGILGVGQ IGTEIARLLRSVGMTTWGLGRNERKHKPPEFNVVKTTNDMTEFLQSCDYLINVLPSTASTKNLLSGETLKQCNKSPCFIN VGRGDIIDDGSLLKALKNDWLSGAILDVVNQEPLPQDSPLWSTPNVVITPHISGPCLAEPIADVFARNLSNYLEGKPLDY EIKWDVGY |
|