Gene
| Gene Model ID | pfu_aug1.0_4140.1_59445 |
|---|---|
| Locus | scaffold4140.1 : 31592 ... 40085 : - |
| To GenomeBrowser | scaffold4140.1:31592..40085 |
| Genes list of scaffold | scaffold4140.1 |
| Synonym | pfu_aug2.0_46.1_20118 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4140.1_59445.t1 | 2 | 1 | ANF_receptor | 8 | 163 | 1.4013e-44 | 152.3 | 4.0e-06 | 0.0099 | 14.7 |
| pfu_aug1.0_4140.1_59445.t1 | 2 | 1 | Peripla_BP_6 | 50 | 103 | 1.8e-12 | 47.3 | 0.077 | 190.0 | 1.1 |
| pfu_aug1.0_4140.1_59445.t1 | 2 | 2 | ANF_receptor | 272 | 659 | 1.4013e-44 | 152.3 | 1.20512e-43 | 3.09999e-40 | 138.0 |
| pfu_aug1.0_4140.1_59445.t1 | 2 | 2 | Peripla_BP_6 | 324 | 482 | 1.8e-12 | 47.3 | 9.4e-15 | 2.3e-11 | 43.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4140.1_59445.t1 | gi|219801747|ref|NP_001137306.1| | metabotropic glutamate receptor 5 isoform b precursor [Mus musculus] | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug1.0_4140.1_59445.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4140.1_59445.t1 atgatagaactaaggaaagtaaaatgggtcatgtcagacttcgttggtacgagcccggatgtgttcactacgtcacttaa aatgcagcacacggctggtatatttaccgtttccatgtcatcaattccagtccctgaagtgaagacttatttcaatgaga aatgggcaacaagactaattcagcctcaaaacgatccactgaagaggctgatgaatgaagtacaaggtcctaaagaagag tggaataaagacttcgtcatgtctaacatagatagtgtgtatgcattagtagaagccgtgcgacaagctttcctcaataa atgccagtattattccaccatttgtgacggttttgatacttttctcaaaacaaatctggtggacacattaagaagggtga acttctcatattctagtttgaatgacacatacggaccgacagagctgataaatgcagaacacggcttcagttttgacgac caaggtgatttggtccgtgatacaggaacacctctctatgacatcaatatctatgacggctctagtttcattaaggttgg taattttacgaatgatcaattacatttagacgattctctcctgacagtccacacaacatttacatcgacgtgttctataa tgtgtacagagtgtaccgagatgcccaagattccataccgttacatgccaggcgcaaccggaagtggcagtagtctgttt cttggaatattcacgttgcatgacaagaataagactgacgaatttcagtgcgggtctttccgtaatcacactgtaggtta tgacactattggcatggaagctttcttccacgctgtacaagaagtcaggagagtaactggactaaattttagtgcaattg catttgacgattgttacagtctgaacagtgcatcgtatattgtatcagaatttctatcaggaaatatgcaaatcagcgac ggtgcaggcggcttggttgatccacaacgagttgctgtagttattggaccatactctagtggcgtgaccgtgcctttgtc tttccaatttatgaatctgaagatgccagtagtttcttacgcatcaacatcacctgacttagatgacaggaacaactttc catactttttcagaacggtccctagtgatatagaccaggcggcagcaatgatccaaatcatacgaaaattcaactggcat tacgtaggacttgtatatgtggataacaattatggtagcaaaggtaaagaacttctgatgaggtacgcgatcgaacactc tatttgtattgctgatccaattgttgtctcggattcaccgaacgaagattactataatgtccttgccaaaatgaattcaa agaaaacatctgttttcctttactttggaacagacacagtgatgcgtaacatactacaaaaactggacgttttccgagac aatttccattttatgtttatagcaagtgaggataactatgacattctacagcagttcggtgccgtgtctgaagggtctct tgtatttaagattgataccatcactgtggataaaactttcaaccaatatctcagagataggacacctcaactggagactg gaaattcgtggtttcgagaattttggtcttactactttggatgcaacccgataggtggtttcgataagcgcgacttcgca gagtgttcgtatggacagtattttaatgattcatccatatcaaaattcgtaaatgaccagtctgtgaatcaaataatgaa tgctgtatatgcatcgggggttgcactgaaagaggttcaagaaaagttatgtattatatcgcctcctccgtgcgagaatt ccatggagcgagcgaatgaaatggctgccatttttcaagatgtaaaactgaatataagtcagtctggatcaacaagtcag tttcaagtgtttaacaatgaaaggaatgggaatcttggattcgagattttgaatgtacagcaatctggaaatagctaccg aaatgtaaaggtgggaagttacagaagtggctctcttactatggaaaacatagaaagtgtccatttctatgaccaagatg gacggcgaactcagatgaaatccgaatgtactcgtgaactttgttcacattgttctgtatataatccaaccacaaccaca atgtcaactgccacacagaccaaaacggagaaaccactagaggagctccgaacagctgatgtcattcttatagttttgtt aagcgtcatttgtgtttttctctgcatttctataacttttgtgacgtgttacttcaggaaaaagatcaaagatcttcgat taaggatgctgaacaaccaaccaaaaatagtttacgccaatgacggcgcgcatcacttcaacactttgaacttgcgcagt gaggcaacatcaaatggaactattcattttcaaaacgaggagagatctcatggtaatgactccggcggtgtagtgaatga agctttcttgcctgataactatcttcatgttgccagtagtgaaaaggcgagtagtccaagaatttcaaatccagctggat actcgccattatctaacaatccacccgttgcaccggaaatggttaagattcagacacgaccaaccagtgccatccaaaat agaccgtctcagcgcaaaccagatctccctccacgcgatcatccacaaaatcataaaagtaacaatagcacgtcttctct tgacagtgggaatctcactccgaatgggtaccctaaaatgggcacaggtccatctgtactaaatggtgttatgacgccat tatctgtttcaggaagtgttagtccgagagggagtgaagtcaattcttcttctggacagtctcaagttcagcctcgtatg ggtacatcgctgcagaatagtgcacagaactcacctctcaggttttctcctcaagaatactcattacaagacaaaggtca ttctccacaaacacccaactacactccccccaatcaaagtccgatacggactccaaactttacgccacctcagttaagcc ctgtatcacttgaaacattctcacctccattgaattccaatgaacaaagacgaactcgtcttgtgagcggagcgagttct ccggacggggagggtaaaatatctcaagtatga |
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Protein
| Protein ID | pfu_aug1.0_4140.1_59445.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4140.1_59445.t1 MIELRKVKWVMSDFVGTSPDVFTTSLKMQHTAGIFTVSMSSIPVPEVKTYFNEKWATRLIQPQNDPLKRLMNEVQGPKEE WNKDFVMSNIDSVYALVEAVRQAFLNKCQYYSTICDGFDTFLKTNLVDTLRRVNFSYSSLNDTYGPTELINAEHGFSFDD QGDLVRDTGTPLYDINIYDGSSFIKVGNFTNDQLHLDDSLLTVHTTFTSTCSIMCTECTEMPKIPYRYMPGATGSGSSLF LGIFTLHDKNKTDEFQCGSFRNHTVGYDTIGMEAFFHAVQEVRRVTGLNFSAIAFDDCYSLNSASYIVSEFLSGNMQISD GAGGLVDPQRVAVVIGPYSSGVTVPLSFQFMNLKMPVVSYASTSPDLDDRNNFPYFFRTVPSDIDQAAAMIQIIRKFNWH YVGLVYVDNNYGSKGKELLMRYAIEHSICIADPIVVSDSPNEDYYNVLAKMNSKKTSVFLYFGTDTVMRNILQKLDVFRD NFHFMFIASEDNYDILQQFGAVSEGSLVFKIDTITVDKTFNQYLRDRTPQLETGNSWFREFWSYYFGCNPIGGFDKRDFA ECSYGQYFNDSSISKFVNDQSVNQIMNAVYASGVALKEVQEKLCIISPPPCENSMERANEMAAIFQDVKLNISQSGSTSQ FQVFNNERNGNLGFEILNVQQSGNSYRNVKVGSYRSGSLTMENIESVHFYDQDGRRTQMKSECTRELCSHCSVYNPTTTT MSTATQTKTEKPLEELRTADVILIVLLSVICVFLCISITFVTCYFRKKIKDLRLRMLNNQPKIVYANDGAHHFNTLNLRS EATSNGTIHFQNEERSHGNDSGGVVNEAFLPDNYLHVASSEKASSPRISNPAGYSPLSNNPPVAPEMVKIQTRPTSAIQN RPSQRKPDLPPRDHPQNHKSNNSTSSLDSGNLTPNGYPKMGTGPSVLNGVMTPLSVSGSVSPRGSEVNSSSGQSQVQPRM GTSLQNSAQNSPLRFSPQEYSLQDKGHSPQTPNYTPPNQSPIRTPNFTPPQLSPVSLETFSPPLNSNEQRRTRLVSGASS PDGEGKISQV |
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