Gene
| Gene Model ID | pfu_aug1.0_41403.1_19819 |
|---|---|
| Locus | scaffold41403.1 : 1 ... 5115 : - |
| To GenomeBrowser | scaffold41403.1:1..5115 |
| Genes list of scaffold | scaffold41403.1 |
| Synonym | pfu_aug2.0_1527.1_24975 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_41403.1_19819.t1 | 2 | 1 | Beach | 109 | 136 | 0.0 | 193.2 | 0.26 | 3900.0 | -3.0 |
| pfu_aug1.0_41403.1_19819.t1 | 2 | 2 | Beach | 178 | 373 | 0.0 | 193.2 | 0.0 | 0.0 | 193.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_41403.1_19819.t1 | gi|260787930|ref|XP_002589004.1| | hypothetical protein BRAFLDRAFT_87476 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_41403.1_19819.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41403.1_19819.t1 atggacccttcatcaaatggtaatgctcagaaacttgttcagaacatcattccagttttgtttttgcacgaggcagaaga tgtcatactacttgtggaaccctatgttccatgtaccctacatagtgctatatcatacagcccggctattgttgggcttt catttgccaaacccctgttcattctatatcaattacttcaagctatgcaagcattccataattttggtctcagcattgga aatctgtctcttcatagcattgtcgttgatgaaaaactgtggatatatgtcacaaatggaaattttatacctgtacatac tcggagagactttgattcagcaatttgtcaaaatgacaaacaaaatgattgtgcagaaactttgaaagatggtgcagaaa agaaagagtcattactaagcaaaatggtgcagatgaatgaaaaggaggaaatgagtcaagtaaacgatgcaaggatgttt ttgaaatcagccgttatagggcagtatgaagaaaaagatttggcaaaattcacagaacagtggagcaatagaaagttatc aaatttccgctacatcatgatcctgaattttatggctggtcgtcggatgcacgatccgaatcatcaccctattcttccgt gggtgatggatttcacagggccagatacaggatttcgagatctaatgtattccaaatttagactaaacaagggagacaat cagttagatctgaccttcgaatcctttccaagtatgtctgattcaactcacattccacatcatgtctcggacgtattgtc tgatattacatactatgtgtataaagccagaagaactccaaaatccatattgtgttctcatgtacgatcaaaatgggttc cgaatgaatacccgttaagtatgctgcgtatgcaagagtggactccggatgaatgcatcccggaatttttcacggatcca acgatattttcttcgatccatgaagatcttccggaccttgagattccaccatggtgcagtaatcctgaggattttatcag taagcacatggcagtgttagagagtgatacagtctctgaatccctacatcactggattgatctgacatttggttataagg tatacttacttttccgataa |
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Protein
| Protein ID | pfu_aug1.0_41403.1_19819.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41403.1_19819.t1 MDPSSNGNAQKLVQNIIPVLFLHEAEDVILLVEPYVPCTLHSAISYSPAIVGLSFAKPLFILYQLLQAMQAFHNFGLSIG NLSLHSIVVDEKLWIYVTNGNFIPVHTRRDFDSAICQNDKQNDCAETLKDGAEKKESLLSKMVQMNEKEEMSQVNDARMF LKSAVIGQYEEKDLAKFTEQWSNRKLSNFRYIMILNFMAGRRMHDPNHHPILPWVMDFTGPDTGFRDLMYSKFRLNKGDN QLDLTFESFPSMSDSTHIPHHVSDVLSDITYYVYKARRTPKSILCSHVRSKWVPNEYPLSMLRMQEWTPDECIPEFFTDP TIFSSIHEDLPDLEIPPWCSNPEDFISKHMAVLESDTVSESLHHWIDLTFGYKVYLLFR |
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