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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_41625.1_19825
Locus scaffold41625.1 : 92 ... 1335 : -
To GenomeBrowser scaffold41625.1:92..1335
Genes list of scaffold scaffold41625.1
Synonym pfu_aug2.0_1012.1_08083

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_41625.1_19825.t1 1 1 DDE_3 12 87 7.9e-09 35.4 1.1e-12 8.1e-09 35.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_41625.1_19825.t1 gi|291227362|ref|XP_002733660.1| 2.0e-14

Transcript
Transcript IDpfu_aug1.0_41625.1_19825.t1
Definition-
>pfu_aug1.0_41625.1_19825.t1
atgatcgtggtaaacggcgtggttcattgtaatgttgttgatggtgctactgatactatccagtatttaaacttttttga
ccaagctatagactgctatacggatgagggataccacgccttggttcccggggatatagtagtcgttgataatgcgccag
ttcatcgttacagtggcggaaatgcgctctctgtgttttcagatcaatttgggatcgaatatgtatttacacctacttac
tcgccagatctaaatcccgtggcaaaataa

Protein
Protein IDpfu_aug1.0_41625.1_19825.t1
Definition-
>pfu_aug1.0_41625.1_19825.t1
MIVVNGVVHCNVVDGATDTIQYLNFFDQAIDCYTDEGYHALVPGDIVVVDNAPVHRYSGGNALSVFSDQFGIEYVFTPTY
SPDLNPVAK

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