Gene
| Gene Model ID | pfu_aug1.0_4165.1_23516 |
|---|---|
| Locus | scaffold4165.1 : 34966 ... 46496 : + |
| To GenomeBrowser | scaffold4165.1:34966..46496 |
| Genes list of scaffold | scaffold4165.1 |
| Synonym | pfu_aug2.0_134.1_13662 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4165.1_23516.t1 | 1 | 1 | Arginase | 15 | 272 | 0.0 | 226.1 | 0.0 | 0.0 | 225.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4165.1_23516.t1 | gi|328933188|gb|AEB70965.1| | arginase type I-like protein [Hyriopsis cumingii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4165.1_23516.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4165.1_23516.t1 atgcgtgaagggggtttgatctctaagttggaggggctcgggcttgacgtggaggatcagggggacctatttctggagaa acatgacgaagacattcacgaccatcccgccaaaaatgttaaaaatgttggatccgcatcaagccagattgcagactctg tgtacaatacgatcaagtcaggcagaacatgtttagcccttggtggagatcacagtatggcgattggttccatctacggt cattcattggctgaacccgatcacgtggttatttgggttgatgcgcacgcagatatcaacacaccccttacttccagcag cggcaacatgcatgggatgccgctttctttcttggtgaaggaggttcaaccatatctcccggacatcccacattttgata acatcaaaccatgtttgtctgcgaaaaatattgcgtacatcggtcttagggatgttgatcctggagagagatatatcatt gaaaaactcggcatccattccttctccatgacagaagtagacaagtttggaatcaaagattgtgtggagaaagctctaca cgccgtagatcccgagggtaacaaacctatccatctgagttttgacatcgacgccctggatccctccctggcaccaagca ctggtaccccagttcccgggggtctcagcatcagggaaggcaactatatcgcagaggaattagctgcaacaggtcgcctt acatgcgtcgacttagcagaggtgaacccaaagctcggaaacgaccgtgacaatgaaacgaccgtccgatcagccattac aatcattcagcactgttttggtaacagacggcagggagtgtatccaaaagactacaaattccccattccggaaaaagtag tccttcccatgccatcataa |
|
Protein
| Protein ID | pfu_aug1.0_4165.1_23516.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4165.1_23516.t1 MREGGLISKLEGLGLDVEDQGDLFLEKHDEDIHDHPAKNVKNVGSASSQIADSVYNTIKSGRTCLALGGDHSMAIGSIYG HSLAEPDHVVIWVDAHADINTPLTSSSGNMHGMPLSFLVKEVQPYLPDIPHFDNIKPCLSAKNIAYIGLRDVDPGERYII EKLGIHSFSMTEVDKFGIKDCVEKALHAVDPEGNKPIHLSFDIDALDPSLAPSTGTPVPGGLSIREGNYIAEELAATGRL TCVDLAEVNPKLGNDRDNETTVRSAITIIQHCFGNRRQGVYPKDYKFPIPEKVVLPMPS |
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