Gene
| Gene Model ID | pfu_aug1.0_4171.1_37813 |
|---|---|
| Locus | scaffold4171.1 : 573 ... 8265 : - |
| To GenomeBrowser | scaffold4171.1:573..8265 |
| Genes list of scaffold | scaffold4171.1 |
| Synonym | pfu_aug2.0_90.1_00205 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4171.1_37813.t1 | 2 | 1 | CABIT | 25 | 40 | 3.4e-22 | 78.7 | 0.00017 | 2.5 | 7.0 |
| pfu_aug1.0_4171.1_37813.t1 | 2 | 2 | CABIT | 61 | 313 | 3.4e-22 | 78.7 | 3.4e-24 | 5.1e-20 | 71.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4171.1_37813.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4171.1_37813.t1 atgataaaaaggaagttgaatgcgcttgcacagaaggaagatattgatgttcgagattttgtatggagttcacaatcata tactttgaaagaacttctacaaaaggtgaaacttccatgtgtagcaatatgtagcgcagaaaagtgtggagtggaatgga aagacttcagatttacactgacccaaccgcttcttcttcatagcaccagaaaaacaaagaagatatgtgtgaaatgtttg caaaaggagcagccttcgacagaatttcgagagcttgaccatcatttggtcatccctgccaattacgaaggatggttcca cattataaaggcaccagacgatcgtgtgaaaccagaccaaacggtatcagaagtggtggccagtggtgcagatcagttcc ttgttggcagaagtgtatctggtattgacctcatattggactcagaagatggcgaaggcgaaatggaaattaacaagaaa agcatcggtcatggcggcatcctaagagtgaatagattgtatgatcaagaactaaacgtcatcaacaagacaagacagaa acaaacagaagatagtacgttcaaggaaaaggtcgttgaggaggaaaacaacaatttaaaatatgtaatgtgcttcgacg aacacgaggacgatgtcgtgtttccatcgtccaaaaagggattcttctacagaatctatgatcacgaagagtctggaata ggacttgtttctgtcgaggatctgatagacaaacaagacgaattcccgcttctagtgcgtcacatgataggggagatgcc aatgctgactaccacgtattccagtgttatgaaatgctttactgtgatagaggaacagactattcttgcatcaactttgg atccagactcgatggcaccactggagctacaagttgactcggacgtcaaattcaagctgtctctaaacgatgcaaaagtg aaatattcggacacttacaccgaggctcttcagctgtgcaaaagtgatggtgatgactatcttagaggcatcaaagctgc attcaagtttcgaccgagtactcccgaggaagaacaaccagtagctaaatcagaagcacatgtaatagaaaaggaagcaa tagaaatagaaaaggagacaatagaaacagaaacagagacaatagaaagggaaaaagtcgcaatagaaatggaccagcca atttcacaagaagcagctcttgtagaggttcacgtaggtacaatagaaaaagaggaaatagaaaaacgaatttcccaaga agaagctgctgtaggtctagaagtcacttcgccaaacgacaccatgtccgaaaccaccgccaatatttctgatgacgaac catcttgttatggaagcgacatggaggaggaggatgctcagtcagaattcgcgttcgagtggaccgaaaatgagatgacc aagccaagcacggcaactaaaactagtgcaaaaatctatgtataa |
|
Protein
| Protein ID | pfu_aug1.0_4171.1_37813.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4171.1_37813.t1 MIKRKLNALAQKEDIDVRDFVWSSQSYTLKELLQKVKLPCVAICSAEKCGVEWKDFRFTLTQPLLLHSTRKTKKICVKCL QKEQPSTEFRELDHHLVIPANYEGWFHIIKAPDDRVKPDQTVSEVVASGADQFLVGRSVSGIDLILDSEDGEGEMEINKK SIGHGGILRVNRLYDQELNVINKTRQKQTEDSTFKEKVVEEENNNLKYVMCFDEHEDDVVFPSSKKGFFYRIYDHEESGI GLVSVEDLIDKQDEFPLLVRHMIGEMPMLTTTYSSVMKCFTVIEEQTILASTLDPDSMAPLELQVDSDVKFKLSLNDAKV KYSDTYTEALQLCKSDGDDYLRGIKAAFKFRPSTPEEEQPVAKSEAHVIEKEAIEIEKETIETETETIEREKVAIEMDQP ISQEAALVEVHVGTIEKEEIEKRISQEEAAVGLEVTSPNDTMSETTANISDDEPSCYGSDMEEEDAQSEFAFEWTENEMT KPSTATKTSAKIYV |
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