Gene
| Gene Model ID | pfu_aug1.0_4171.1_37814 |
|---|---|
| Locus | scaffold4171.1 : 9866 ... 13247 : + |
| To GenomeBrowser | scaffold4171.1:9866..13247 |
| Genes list of scaffold | scaffold4171.1 |
| Synonym | pfu_aug2.0_90.1_00206 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4171.1_37814.t1 | 1 | 1 | CABIT | 95 | 212 | 3.0e-12 | 46.1 | 2.4e-16 | 3.6e-12 | 45.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 2 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4171.1_37814.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4171.1_37814.t1 atgatcttggcaccattcaaaaatgaaatgtgctggctgtttctccgtctgcagtcacgtacagccaaggaccacacatg tcatagaaccatagaatctctggccaaacatggagtgaaggcattcttgaatctcagcaaactgacggcgttccaggtcg gacgaaatcacacaacaaatgactatatcaaaactgactatacaccaggcaatgtgtttctgatcgaaaaagtatttctg ggcaccgctagggtgaagacagagtccaaagtactacatatgaaatcgaattcaattcagcaaatccagtatctgaagtg caaagacgagaaagatacggatattttgatacctatgagccaaccaggcgaatttattgaagccctacctagccccctgg gcaatgggcgtctgtctgttaacgcagaaagtctgattgctacacagaagtttccgatcgtggttcgcttcattagtggg cggaatcgtccccgtttaacgtcgttctcaggactctttactctgttagattcgtttgaagaaacaacagtatttggatg catccttgaccttcatggtttcactatgttagaaatccccgtctcctcacctctcacattccagctcgcattaaacacca cagatctttacccacaccctgtcgtgaaaaaggctctccgactctgtgacatgaaggcacatatcttcctgcgggaactg aagtataagttcaaatttgcgcagcgtatcttacagaaatctggtagacgcatgacgccaatcgacgacgagaatgaccc ctggagacccaccgagtgctgcaaatag |
|
Protein
| Protein ID | pfu_aug1.0_4171.1_37814.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4171.1_37814.t1 MILAPFKNEMCWLFLRLQSRTAKDHTCHRTIESLAKHGVKAFLNLSKLTAFQVGRNHTTNDYIKTDYTPGNVFLIEKVFL GTARVKTESKVLHMKSNSIQQIQYLKCKDEKDTDILIPMSQPGEFIEALPSPLGNGRLSVNAESLIATQKFPIVVRFISG RNRPRLTSFSGLFTLLDSFEETTVFGCILDLHGFTMLEIPVSSPLTFQLALNTTDLYPHPVVKKALRLCDMKAHIFLREL KYKFKFAQRILQKSGRRMTPIDDENDPWRPTECCK |
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