Gene
| Gene Model ID | pfu_aug1.0_4200.1_59459 |
|---|---|
| Locus | scaffold4200.1 : 26976 ... 49422 : + |
| To GenomeBrowser | scaffold4200.1:26976..49422 |
| Genes list of scaffold | scaffold4200.1 |
| Synonym | pfu_aug2.0_1527.1_24972 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4200.1_59459.t1 | 3 | 1 | CLPTM1 | 42 | 127 | 3.1e-34 | 118.4 | 9.8e-14 | 1.5e-09 | 37.1 |
| pfu_aug1.0_4200.1_59459.t1 | 3 | 2 | CLPTM1 | 133 | 221 | 3.1e-34 | 118.4 | 4.3e-24 | 6.4e-20 | 71.2 |
| pfu_aug1.0_4200.1_59459.t1 | 3 | 3 | CLPTM1 | 217 | 247 | 3.1e-34 | 118.4 | 2.5e-05 | 0.37 | 9.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4200.1_59459.t1 | gi|156368579|ref|XP_001627770.1| | predicted protein [Nematostella vectensis] | 5.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_4200.1_59459.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4200.1_59459.t1 atgcatatgcctttcgaattctgcaagtgcaacaggttgtacatggatgttattgattatcaaaggtcaaagtccataga aatatcgaacaacttaaattcttatgtgtttttcacaatacaggatatgtatttatatatatcagaaggagagagattca aggactttgatgaccctgatgccttattttggtctcagaaaggtttagtgtatggagactggtctagcggtccaaacagt gacggctcttacatcaaatatggaaagatcgctactcctcctaatgtacagaataatggatctctcttcctacatgtgta tattgtaaagggaggattgtcccccaatcccaaggacaaaggaaaatacagaagggagtttacaatatacaagtctaaac atgtagatttcctaccagggacaaacaagtactatcctgttttgtatttcaatgaatattggaaccttaacagtgaatat caacccatcaatgacactacaaaggagctaaatttgactgtgacattcagtcctatttcactgttcaagtggcagatgta cgcagctcaaggaatgcgtaacaagtggtatagtatgatgggagtagatatgatggaggaatctgatgaagatcaagact cacttaaggtggatacagataatcctatactaggaattatacctaaagtctactttgaagacaagtccacatatactgaa tctcataccaaagaatatgacatgtga |
|
Protein
| Protein ID | pfu_aug1.0_4200.1_59459.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4200.1_59459.t1 MHMPFEFCKCNRLYMDVIDYQRSKSIEISNNLNSYVFFTIQDMYLYISEGERFKDFDDPDALFWSQKGLVYGDWSSGPNS DGSYIKYGKIATPPNVQNNGSLFLHVYIVKGGLSPNPKDKGKYRREFTIYKSKHVDFLPGTNKYYPVLYFNEYWNLNSEY QPINDTTKELNLTVTFSPISLFKWQMYAAQGMRNKWYSMMGVDMMEESDEDQDSLKVDTDNPILGIIPKVYFEDKSTYTE SHTKEYDM |
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