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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4200.1_59460
Locus scaffold4200.1 : 50362 ... 54645 : -
To GenomeBrowser scaffold4200.1:50362..54645
Genes list of scaffold scaffold4200.1
Synonym pfu_aug2.0_1527.1_24974

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 2
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_4200.1_59460.t1
Definition-
>pfu_aug1.0_4200.1_59460.t1
atggtatacgaggacgctttgaccattctgagctatgcttctccctatcctgtcaaagtcactctccagaaggagctcac
cacgtccaaaaataggaaaccaagtgatgcatattcaaatctcagtcaccctttgtataggagccaatcagtggacacca
tttcgaaaatcggcaaagagacaacattcgttcccaagagaagtttgagtctggcgagccaaaacattcttgaggaccga
ctaaagaaaagtcctttaatgacaaaattctcatttgaaaaggaatcgatacgagaatctcaggaaatgttcaaacacga
tacctcattctcagagctcaaagttgataccaacttaccgatttctacaacagttgagatcaataccccacctgaggaag
ctaacaaaaaagtggaggaaattttccaggctgaggaaactgtaaataatgagtcagccccatctgtatcaactctaaca
ccgccagaggagtttacccagggagatgacggtaaaccgccaccagagccattggtcccacctccgcctcttgattttga
taccacagattcaacaagtacaactcaggtttcatcagttgctgccgagtactcggctttatttgacagtcttaacgagc
aagacaaattggatatgttgcgtctaagctacgaggaccctgatgactcatttaactacagtcacaacactgttactatg
gaaacgtccttgacagagggagagtcgagtgctaacacagtgatagacttggaccctaaatcacctgcaccaatcaaacc
tgagaggaggaagaaaaagagttcaaatggaagtgtatcgtctgctgagccatctccacgacttctaccggaaccagacg
gcgtggatgatgacgtaattgcgccagtttctatggaaactgtacagtgttcgccttctacggatgagataaatgaggac
gtgattatgcctgaaagtaaaacgagagatgtgtcgattttatcaaaaagtattgaattttcggtaattagtaataacaa
tgatgccatggaggacgagcctgaatcaccacgcaattcaagtaaaactctcgtagactatagtctgtctgacatggaaa
atactgtcagaccacaaacaccagaaaatcatgtggtagaggaagatatgattaccccagtgcaaaacaaacggggaaac
ttggaaagttcattaaaagtcttcagtaattccgacacttctgtaaccccaactccttctacggcttcatatagagaaaa
tgtgaaggacacgagcagtgacagttcagacgctgacaaaagtgatacaaaaggaccaaacacgaccataggaagtgttg
atttcaacttaaatatgacttctgatcctactttattttccacaccatatcccagcagaaatacaaaggaagcatccagt
gggatgtcttacgatatttcaatgatggaattgaatgacattgagaacaaacttcagaaagaacccaaggaaatgggaaa
gggagggatatcattcgaaataagagatgacgtggtttccggcggaactttattgactagtgtctcaaaaactgtgagta
attctgagtatcacgtatcaaggacgcggtcatatcaggatgtaggcgaaacggagaaaatcaagttgcaaaggcctgca
tcgttcaaagaggactattctacgtcaggcagcaatatggaaaatgacaatactctcgattggtccgggaaacgactcgt
gcgagctgggtctttctcggaaatagcacaagacgccgaacaagactgggtggatcataataggatagataaagatgaaa
atgaagatagttcgataggtaataaccgcgatttgaattcgtccgaggaaagcttagaacaatcagaaagaaaaggactg
tcaaagccgacaatgtttcgagctagagaaaatctagctaatttgtcgtccgagaattcagactcgttacagtcaatcac
gagctccagtagaggctcgactcctccccctccgtatacagccaatgggaacgaagatcaaggactgggtacctccccag
aaagttctcctattaaagttcctctgaatatcaatgaccttaatacctcaggactgattgatgttatacctaccgataca
tccatcaatacagacaattctgttgttacctcaacagtggaaagtaacagcaattttgctgttaccgtagaatcaagtca
tggggatgaggcagactgctag

Protein
Protein IDpfu_aug1.0_4200.1_59460.t1
Definition-
>pfu_aug1.0_4200.1_59460.t1
MVYEDALTILSYASPYPVKVTLQKELTTSKNRKPSDAYSNLSHPLYRSQSVDTISKIGKETTFVPKRSLSLASQNILEDR
LKKSPLMTKFSFEKESIRESQEMFKHDTSFSELKVDTNLPISTTVEINTPPEEANKKVEEIFQAEETVNNESAPSVSTLT
PPEEFTQGDDGKPPPEPLVPPPPLDFDTTDSTSTTQVSSVAAEYSALFDSLNEQDKLDMLRLSYEDPDDSFNYSHNTVTM
ETSLTEGESSANTVIDLDPKSPAPIKPERRKKKSSNGSVSSAEPSPRLLPEPDGVDDDVIAPVSMETVQCSPSTDEINED
VIMPESKTRDVSILSKSIEFSVISNNNDAMEDEPESPRNSSKTLVDYSLSDMENTVRPQTPENHVVEEDMITPVQNKRGN
LESSLKVFSNSDTSVTPTPSTASYRENVKDTSSDSSDADKSDTKGPNTTIGSVDFNLNMTSDPTLFSTPYPSRNTKEASS
GMSYDISMMELNDIENKLQKEPKEMGKGGISFEIRDDVVSGGTLLTSVSKTVSNSEYHVSRTRSYQDVGETEKIKLQRPA
SFKEDYSTSGSNMENDNTLDWSGKRLVRAGSFSEIAQDAEQDWVDHNRIDKDENEDSSIGNNRDLNSSEESLEQSERKGL
SKPTMFRARENLANLSSENSDSLQSITSSSRGSTPPPPYTANGNEDQGLGTSPESSPIKVPLNINDLNTSGLIDVIPTDT
SINTDNSVVTSTVESNSNFAVTVESSHGDEADC

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