Gene
| Gene Model ID | pfu_aug1.0_4200.1_59463 |
|---|---|
| Locus | scaffold4200.1 : 81916 ... 100223 : + |
| To GenomeBrowser | scaffold4200.1:81916..100223 |
| Genes list of scaffold | scaffold4200.1 |
| Synonym | pfu_aug2.0_74.1_13529 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4200.1_59463.t1 | 4 | 1 | WD40 | 129 | 164 | 3.6e-12 | 45.6 | 1.6e-12 | 2.4e-08 | 33.5 |
| pfu_aug1.0_4200.1_59463.t1 | 4 | 2 | WD40 | 176 | 211 | 3.6e-12 | 45.6 | 2.9e-05 | 0.44 | 10.5 |
| pfu_aug1.0_4200.1_59463.t1 | 4 | 3 | WD40 | 228 | 245 | 3.6e-12 | 45.6 | 0.76 | 11000.0 | -3.5 |
| pfu_aug1.0_4200.1_59463.t1 | 4 | 4 | WD40 | 269 | 294 | 3.6e-12 | 45.6 | 0.00055 | 8.2 | 6.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4200.1_59463.t1 | gi|189240288|ref|XP_973124.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4200.1_59463.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4200.1_59463.t1 atggtacacatagtaagtgtagaatccagctctcctctcagcccctcctcatggaacacacggaaaacctatagtctgac caatataactgaggacagagatgagacatttgaggggagtggtcgctacagagagaacattaaagaagagttagaaaatg tcttcacaccagaattagcctatgcatcttacataccattttgcagaatatttggcagcatacatatagagcagcatctc cctaatgaagatttaatacgacacctctgttctcagtatgatgttaggtttgacgtggattcctcagagagtggctcaga acctcagtcacctagtgaaggtctgagtgagcgagacacgctgtttaatttcaagcacatcaggttacactcgtttgagg gtcactctaatagtgtccgatcactgaccgtactaaacaacgaaaactccttcatcagtgccagtaaagacaaaacagtc aagctgtggtctgttaaatgctttggtgatggaactggcaagagtaaatgtcagatgacctatcaccgccataagaaatc tattttctctgtggtatatctggactcagtgaggctagtagccacttgtgatagctctgtacatatatgggacccgttta ccggtgagattgtacgtcagttagactcatctcggtatgctccaatcacggccatggtagccttaccagctccgagccct cagataatcacagcaactaatgaggcttcacttaagtaccttgacctaagaacagcaaattatgctcatgaattcaagac cagtgctgtatcagcaggtcacacagacccagtacattgttttgccatgtataaaggacaagttataagtgctacaacgg gaaacaaaatcggcatccattcttctactgagagtcaggtcaaggacacaaacctttga |
|
Protein
| Protein ID | pfu_aug1.0_4200.1_59463.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4200.1_59463.t1 MVHIVSVESSSPLSPSSWNTRKTYSLTNITEDRDETFEGSGRYRENIKEELENVFTPELAYASYIPFCRIFGSIHIEQHL PNEDLIRHLCSQYDVRFDVDSSESGSEPQSPSEGLSERDTLFNFKHIRLHSFEGHSNSVRSLTVLNNENSFISASKDKTV KLWSVKCFGDGTGKSKCQMTYHRHKKSIFSVVYLDSVRLVATCDSSVHIWDPFTGEIVRQLDSSRYAPITAMVALPAPSP QIITATNEASLKYLDLRTANYAHEFKTSAVSAGHTDPVHCFAMYKGQVISATTGNKIGIHSSTESQVKDTNL |
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