Gene
| Gene Model ID | pfu_aug1.0_4202.1_44892 |
|---|---|
| Locus | scaffold4202.1 : 1 ... 17544 : + |
| To GenomeBrowser | scaffold4202.1:1..17544 |
| Genes list of scaffold | scaffold4202.1 |
| Synonym | pfu_aug2.0_1012.1_08093 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4202.1_44892.t1 | 3 | 1 | TPR_11 | 84 | 141 | 1.4e-08 | 34.2 | 2.1e-06 | 0.0044 | 16.6 |
| pfu_aug1.0_4202.1_44892.t1 | 2 | 1 | TPR_17 | 90 | 117 | 1.0e-05 | 25.3 | 0.0055 | 12.0 | 6.4 |
| pfu_aug1.0_4202.1_44892.t1 | 3 | 2 | TPR_11 | 131 | 151 | 1.4e-08 | 34.2 | 0.0032 | 6.8 | 6.4 |
| pfu_aug1.0_4202.1_44892.t1 | 2 | 2 | TPR_17 | 133 | 152 | 1.0e-05 | 25.3 | 5.4e-06 | 0.011 | 15.8 |
| pfu_aug1.0_4202.1_44892.t1 | 3 | 3 | TPR_11 | 181 | 224 | 1.4e-08 | 34.2 | 4.1e-05 | 0.087 | 12.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4202.1_44892.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4202.1_44892.t1 atccagtgattttgaaaacctcaatgacgagcagacggagctacataccaaaataaacagtgacatagcccctacatcac aggcagaaaaagatatataccctgaagtggacatattactagaaggcagagatgaggataaattcaaagcgtaccagctg cttgattcaaacaggatcaagacctcatatcagatatcacagatagagggcgccaggggtaacaaggtgaaacagaagga gctagtctacgcagctatggatgcagctacaaaagctgtggacattgatgaaaattgtgctaatgctcataaatggtatg ccatcacactgggaagtataggtgattatgagggaactcaggctaaaatcaaaaatggatatacttttaaggaacacatc gagcgtgccatagaattaaatcccaccgacccatcaaatcatcatttactgggaagatggtgctatggggtgtacatgct gtcatggatagagaggaaggctgcagcgactctgtatgcagcaccgccttcttcaacagctgatgaggcattgaaacatt tcttggaggctgaacgattaagacctgagaaatggaaagaaaacatcttatttattggaaagtgttatatacagcaatca aagtacaaagagactgtagagtggctagagaaaggtcaagctatccctgttataagtcaagatgataaaacgtctcagga ggaaatcctgtctttactgcagaaatacagaggatattaa |
|
Protein
| Protein ID | pfu_aug1.0_4202.1_44892.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4202.1_44892.t1 SSDFENLNDEQTELHTKINSDIAPTSQAEKDIYPEVDILLEGRDEDKFKAYQLLDSNRIKTSYQISQIEGARGNKVKQKE LVYAAMDAATKAVDIDENCANAHKWYAITLGSIGDYEGTQAKIKNGYTFKEHIERAIELNPTDPSNHHLLGRWCYGVYML SWIERKAAATLYAAPPSSTADEALKHFLEAERLRPEKWKENILFIGKCYIQQSKYKETVEWLEKGQAIPVISQDDKTSQE EILSLLQKYRGY |
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