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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4205.1_59465
Locus scaffold4205.1 : 567 ... 13015 : -
To GenomeBrowser scaffold4205.1:567..13015
Genes list of scaffold scaffold4205.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4205.1_59465.t1 1 1 2OG-FeII_Oxy 43 135 1.6e-07 31.5 3.0e-11 2.2e-07 31.0
pfu_aug1.0_4205.1_59465.t1 1 1 2OG-FeII_Oxy_2 45 135 3.0e-16 59.8 6.7e-20 5.0e-16 59.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4205.1_59465.t1 gi|157112246|ref|XP_001657457.1| AAEL000938-PA [Aedes aegypti] 2.0e-30

Transcript
Transcript IDpfu_aug1.0_4205.1_59465.t1
Definition-
>pfu_aug1.0_4205.1_59465.t1
atggaagcagtaccccagtccctgtctccttccaatgaacttccaccaggattgatactcatccctgattttgtaacaga
ggattatgctgggaaactcttgtcagccattatctggaaggacagtgctaactcaggtattcctccccatgtagacactt
ctgcagcatttgaagatgggatcatgtcgcttagtttgggatcacaggtattaatggatttccgacatcctgacggcaga
caccttactgtactccttccacccaggagtctgatgataatgacgggcgagtcacgttacctctggtcacatggtataac
gccacggaaatcggacatcgttagaatggagtccggcaacttgaatgtactgaaacgcaatgtccgaatttccttcacat
ttaggaagatcatacctccacaagaaagattaagtagaattctacctacgttcaacgataaaacaagtgaaaggtaa

Protein
Protein IDpfu_aug1.0_4205.1_59465.t1
Definition-
>pfu_aug1.0_4205.1_59465.t1
MEAVPQSLSPSNELPPGLILIPDFVTEDYAGKLLSAIIWKDSANSGIPPHVDTSAAFEDGIMSLSLGSQVLMDFRHPDGR
HLTVLLPPRSLMIMTGESRYLWSHGITPRKSDIVRMESGNLNVLKRNVRISFTFRKIIPPQERLSRILPTFNDKTSER

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