Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4217.1_30616
Locus scaffold4217.1 : 1666 ... 8563 : +
To GenomeBrowser scaffold4217.1:1666..8563
Genes list of scaffold scaffold4217.1
Synonym pfu_aug2.0_853.1_11245

Manual annotation
Transcript
Transcript IDpfu_aug1.0_4217.1_30616.t1
Definition-
>pfu_aug1.0_4217.1_30616.t1
atgaatatagacaaccttttatttggagcagaagaagatataattcgaaaagaaatagaaaagaaagatgatgttgaaga
gctaatggaatgggcagaaaaccacaatttatcaaatttcgaatcggtgaaagaaaaagtaaaatctttgtgtgaaaaac
gagagagtcaagaggagagaaagaagttcgggtgtaaagagtgccccaaacaatttgaaaggaaaaatgagttactggtc
catgtacgggcaatccacgaaaatgttcttttcaaatgcggaaaatgcgacaaaggatttgcgtaccaaacaaacagagt
gaggcacgaaaagaaatgtcagggaccacctaaaacgtctactggaaagggtatcaaatgtcgtttatgtgacaaggttt
ttacgggacacaagcaaataagattacacagcaaagaacataaatctggaaagtctgccagcataccacaagaccaagca
tgtgagaacagcatactacaagaccaagcatgtgagaacaacatactacaagaaccaacatgcgagaacagcatactgca
agtcccaacatgtgagaacacagatatggaggtagcaggaccctctacagaccagtctagcagtatccccatagcaaaat
atccaagtaaagagtacagatgtcgaacatgcaacgaacgttttcaaagtagacgtgaattgtatctccacaggaatacc
gaacaccaatcaggagagggtccgagtgcagacatagtcatcccggaggaccacaacgaacaattcaaagtggtctataa
agccaataccaaatttatttatgaagaggacaaagacgatggggtacaagccacgataaacattccattacaaaatgata
tttctgtaaatgacatcatgaagcacgttgaacaaattagcaacaatcagacaaaagccttcaaaattcagttctctttt
ggacttatactacaacacaagaaaacgggtcaattcagatattttattccggcaaggaaccaaaccctgctcatccctcc
ctttctgatccaagacaattcaagtctgaggaaactacgtaacaagttggaagaaataagcttacaagattttctccaga
acacaagagacaacacagaatggaaactatattacctgacaaacctccaaataacgatttacaggacacccttcttaatg
ggagccccaacagatcttccaggttacataaaaaacaacaaaaacgtatgctccttgacgtcatccagcgacgggagacc
atataccgacaacctgtgtatatttagatgtttgtcaatgttactgagtgggagaaccagactcgaacagtcaacccaag
ttcattacaataaatacatggagtacattggtcagagtatcgacaagaaggactttgagggattggacatagaggacata
catcagtttgaaagatgctttgaagtcaatgtcaacatctttagtttacaggaggatgaaagtgtattgcccgccaggag
aagtcattgccattacacgaacacaatgaacctcaatctatttgaaaaccatctttcatacatttccaatatgaaagctt
acagcaaacgttatcaatgtcagatttgtcaacagttctaccccacagcatggagatgtctacagcatgaacgtagatgc
gaaaacaaaacaaaattagtctatccaggtggcttccatcaacataaaggtgatatatttactcaattggacgagtatgg
catacacgtggaccgggacctgtgccattatccatacttcatagtctatgactttgaagccatgctgaaatccaatgaca
cagatacccaaacaggaaaacttcgatgggactcggaacaccaaccaatatctgtcagcatttgttcaaatgtggagggt
catatggaaccagtatgctttgtggatccaaactgtgattccctggtagaaacaatgattgaccacatgcaaacaattgc
agaaaaggccctagaattagccaatgagaggtgggaggaagtgtttattgacattgattctgaaatagacaactgggacc
ccgaagatccccgcgaaaaacagatggcaaaggctttggaaaaaatacgtgagaaatttgaattttacgttacccagata
cctgttttggggttcaattcctcaaattatgatttaaacctgatcaaaaagtacattgccaaacacatgaacttacacga
atgcgactctgtaactattaaaaagaacaacgcatatacttgtatttccaatggtcaactaaaatttctggacattctca
attttctggcgggtggcaccagttactccggatttcttaaagcctacaacattgcagaacagaaaggtttctttccatac
gagtacctaacacaccccgacgtcttaaaggagacccaattacctccccatgaggcattttatagcaatttgaaagagaa
aaacatctcggtagaagaataccagtattgtcaaaaaatctggagagacaaaaacatgcaaactctacaagactttttga
tttggtacaacaatcgtgatgtcggtccctttgtccaggcagttgagaaattacaatcattttactttgaaagaaaaatt
gacgtgttcaaaatagccatgtctgtaccgggaatagccaggcaaatgcttttccaatccagtcaggaaatgggggcctc
gtttgctttatttggagaggaagataaggacttgttcaaaaccgtgaaaaataacatcattggaggaccatccattattt
ttcatcgttacgccaaggtcaaggaaacacacataagacacaataaaaacaaaccatgtcgtaggattgttggttttgac
gccaatgctttatacctatgggcaataggtcagccaatgcctaccggaacctacgtcagaagattgagggagaatgactt
taaaccggaagctcgagacaagtacatggtcgcctatcactggatggattggttaagtaaaacaaggggatacgatataa
gacataggctgaacaacggtaaagaaaagcgagtaggggcatatttagtcgacggacattgtcgcagaactgatacaatc
tttcaataccacggatgctattttcactgccacgattgtattttaacaaaacacataaaaaacgaaaaatggttagccga
gaaagagaggaaatttaacaagacactggatatcagtcagtttattagagatcaaggttttgaacttgttgaaatttggg
aatgcgagtacagagaactcgtaaaacaaaaccaagccctgcaacaagtaatagatgagagatctcccacatttttcacg
agatttaaaagacagcttttagaaaaggacatcctggatgcggtactcaacgacactctgttcggaatgattgaagtaga
cataaatgtaccagaggtgtggccaaccggttttaatgcgccttctctatcgccctacgactactttcaagagatgtccc
ctttgttttgcacgtcagagatcccctttgatattataggtcaacacatgcaggaacatgttgaaaagtatgaattatcc
aagaagccgagacgtctcctcgtgggcgccatgaaagctcgcaaactcttgttagcctctcctttacttcaatggtacct
taaacacggattagaagtgactcacatttaccaagtgattgagtatactccgatgacatgctttgaaacattcgtaacca
atgtaacagaagccagacgtcagggcgatgtaaatccggatttaaaagtcattgctgatacgacaaaaacaatcgggaac
tcggcttacggagggttgatcatggacaaacaaaaacataaagatgtaacgtatgtcatgggagattcggaagctcagaa
cgcagtcaatcagtcaaactttataggactaactcagttggaggatgaaatgtatgaaatcgaaaaagccaagcaaaaaa
tccatctagacctccccatttccctcggctatcaaatcttacagtatgggaagctccgaatgctggaattttactatgat
tttatggataagtattgcgagcgaaaagactttgtctacctggagatggatacagatagcgcgtacatggcaatatccgc
cccctcactggatgacatcatcaaacctaacatgaaaaatgattatctccacgggctttacggcttctgtcaccaagaag
acatcaaagcagacaatatctaccactggtttcccaggaaatgttgtacaagacatgcgcaaagagacaaacgtactccc
ggtctgtttaaagtagagtttgaaggggatcaatttgtaggcctttgttcgaaaacgtacatgccatttcgattgcctgc
tgtgtcggtgtga

Protein
Protein IDpfu_aug1.0_4217.1_30616.t1
Definition-
>pfu_aug1.0_4217.1_30616.t1
MNIDNLLFGAEEDIIRKEIEKKDDVEELMEWAENHNLSNFESVKEKVKSLCEKRESQEERKKFGCKECPKQFERKNELLV
HVRAIHENVLFKCGKCDKGFAYQTNRVRHEKKCQGPPKTSTGKGIKCRLCDKVFTGHKQIRLHSKEHKSGKSASIPQDQA
CENSILQDQACENNILQEPTCENSILQVPTCENTDMEVAGPSTDQSSSIPIAKYPSKEYRCRTCNERFQSRRELYLHRNT
EHQSGEGPSADIVIPEDHNEQFKVVYKANTKFIYEEDKDDGVQATINIPLQNDISVNDIMKHVEQISNNQTKAFKIQFSF
GLILQHKKTGQFRYFIPARNQTLLIPPFLIQDNSSLRKLRNKLEEISLQDFLQNTRDNTEWKLYYLTNLQITIYRTPFLM
GAPTDLPGYIKNNKNVCSLTSSSDGRPYTDNLCIFRCLSMLLSGRTRLEQSTQVHYNKYMEYIGQSIDKKDFEGLDIEDI
HQFERCFEVNVNIFSLQEDESVLPARRSHCHYTNTMNLNLFENHLSYISNMKAYSKRYQCQICQQFYPTAWRCLQHERRC
ENKTKLVYPGGFHQHKGDIFTQLDEYGIHVDRDLCHYPYFIVYDFEAMLKSNDTDTQTGKLRWDSEHQPISVSICSNVEG
HMEPVCFVDPNCDSLVETMIDHMQTIAEKALELANERWEEVFIDIDSEIDNWDPEDPREKQMAKALEKIREKFEFYVTQI
PVLGFNSSNYDLNLIKKYIAKHMNLHECDSVTIKKNNAYTCISNGQLKFLDILNFLAGGTSYSGFLKAYNIAEQKGFFPY
EYLTHPDVLKETQLPPHEAFYSNLKEKNISVEEYQYCQKIWRDKNMQTLQDFLIWYNNRDVGPFVQAVEKLQSFYFERKI
DVFKIAMSVPGIARQMLFQSSQEMGASFALFGEEDKDLFKTVKNNIIGGPSIIFHRYAKVKETHIRHNKNKPCRRIVGFD
ANALYLWAIGQPMPTGTYVRRLRENDFKPEARDKYMVAYHWMDWLSKTRGYDIRHRLNNGKEKRVGAYLVDGHCRRTDTI
FQYHGCYFHCHDCILTKHIKNEKWLAEKERKFNKTLDISQFIRDQGFELVEIWECEYRELVKQNQALQQVIDERSPTFFT
RFKRQLLEKDILDAVLNDTLFGMIEVDINVPEVWPTGFNAPSLSPYDYFQEMSPLFCTSEIPFDIIGQHMQEHVEKYELS
KKPRRLLVGAMKARKLLLASPLLQWYLKHGLEVTHIYQVIEYTPMTCFETFVTNVTEARRQGDVNPDLKVIADTTKTIGN
SAYGGLIMDKQKHKDVTYVMGDSEAQNAVNQSNFIGLTQLEDEMYEIEKAKQKIHLDLPISLGYQILQYGKLRMLEFYYD
FMDKYCERKDFVYLEMDTDSAYMAISAPSLDDIIKPNMKNDYLHGLYGFCHQEDIKADNIYHWFPRKCCTRHAQRDKRTP
GLFKVEFEGDQFVGLCSKTYMPFRLPAVSV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495