Gene
| Gene Model ID | pfu_aug1.0_42188.1_48481 |
|---|---|
| Locus | scaffold42188.1 : 1 ... 4986 : + |
| To GenomeBrowser | scaffold42188.1:1..4986 |
| Genes list of scaffold | scaffold42188.1 |
| Synonym | pfu_aug2.0_690.1_01055 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_42188.1_48481.t1 | 1 | 1 | Tubulin | 16 | 238 | 0.0 | 233.1 | 0.0 | 0.0 | 232.7 |
| pfu_aug1.0_42188.1_48481.t1 | 1 | 1 | Tubulin_C | 276 | 405 | 0.0 | 173.1 | 0.0 | 0.0 | 172.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_42188.1_48481.t1 | gi|1527170|gb|AAB07727.1| | alpha-1 tubulin [Hirudo medicinalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 4 |
| 8-16cell | 5 |
| egg-Dshape | 5 |
| trochophore | 4 |
| >Adult tissues | |
| Dshape | 10 |
| adductorMuscle | 2 |
| maleGonad | 2 |
| mantle | 3 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_42188.1_48481.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_42188.1_48481.t1 atggacctgaatccaaggtcgttagtcaaggtcacagtacatcgcgagtgtatcagcgtccatgttggccaggccggagt tcagatgggcaatgcatgctgggagctgtactgtctagagcacggtatccagcccgatggacagatgcccagtgacaaaa ctatcgggggtggtgacgactctttcaacaccttcttcagtgagacaggggcaggcaaacatgtaccaagggctgtattt gtagacctcgaaccaaccgttgtagatgaggtacgaactggtacatacaggcagctttttcacccagagcagctgatcac tggaaaggaggacgcagctaataactacgcacgtggtcactacacaattggtaaagaaattgttgaccttgtccttgacc gcatccgcaagacagctgaccaatgcacagggctgcagggtttccttatcttccacagttttggtggaggtactgggtct ggtttcacctccctgctcatggaacgcctcagtgttgactatggcaagaaatccaagctggagtttgccatctacccagc cccacaggtatcgacagctgtagtggaaccctacaactccattctgaccacccacaccacactagagcactctgactgtg ccttcatggtggacaatgaggctatctacgatatctgccgacgtaacctggacattgagagacccacctacaccaacctg aaccgtctgattggtcagattgtcagctccatcactgcctctctcagatttgatggtgccctgaatgtggatctgacaga gttccagaccaacttggtgccctacccacgtatccacttccctctggctacatacgcccccgtcatctctgctgagaagg cctaccatgaacaactctctgttgctgagattacaaatgcttgttttgaaccagccaatcagatggtgaaatgtgaccca cgtcacggtaaatacatggcttgctgtatgttgtacagaggagatgtggtgcccaaggacgtcaatgcagccattgccac cattaagaccaagaggaccattcagtttgtggactggtgtcccacagggttcaaggtgggcatcaactaccaaccaccca ctgtggtaccaggtggtgacctggccaaggtacagagggccgtgtgcatgttgagtaacaccacagccattgctgaagcc tgggcacgtctggaccacaagtttgacctaatgtatgccaagcgagcctttgtacactggtacgtaggagagggtatgga ggaaggagaattttctgaggctcgtgaagatttggctgctttggagaaagattacgaggaagtgggcgtcgactctgtgg aggcagagggtgaagaggaaggagatgaatactaa |
|
Protein
| Protein ID | pfu_aug1.0_42188.1_48481.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_42188.1_48481.t1 MDLNPRSLVKVTVHRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVF VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKTADQCTGLQGFLIFHSFGGGTGS GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEGEEEGDEY |
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