Gene
| Gene Model ID | pfu_aug1.0_422.1_43655 |
|---|---|
| Locus | scaffold422.1 : 25756 ... 52597 : + |
| To GenomeBrowser | scaffold422.1:25756..52597 |
| Genes list of scaffold | scaffold422.1 |
| Synonym | pfu_aug2.0_126.1_20291 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | homeobox B7 |
| Description | BLASTP best hit to NCBI Accession AER99869 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_422.1_43655.t1 | 1 | 1 | Homeobox | 111 | 153 | 3.1e-11 | 42.7 | 4.1e-15 | 6.1e-11 | 41.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_422.1_43655.t1 | gi|354474762|ref|XP_003499599.1| | PREDICTED: homeobox protein Hox-B7 isoform X1 [Cricetulus griseus] | 3.0e-17 |
Transcript
| Transcript ID | pfu_aug1.0_422.1_43655.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_422.1_43655.t1 atgaacgattctacctacggtccagaccagcaatgtaacacatggtcaaacggaccatcatatccaacctcagaatcagt agaatcgaacactcccagaacaatgtgcaccagaccatattacaatgacgctatgccacacgactacacaatgagatcca atcacaattcaacgtctgatccattttcacgacacacaccctgcaatggactcactgtccaaaagcgtgacatccgaaat cagagtgatctgagcacggacatcggacagaagatgagcaatttccgtccaatgttcccctggatgaaaaatatgaaaga tataggtagaaaacgaggtcgtaagacatacaccagacaccaaacccttgaactagagaaggaattcctatacaaccgat acttgacccgccggcgtcgacaggagatcgcctccgccctcagcctgactgagaggcagaatatatatgcatacgttttg ccctaa |
|
Protein
| Protein ID | pfu_aug1.0_422.1_43655.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_422.1_43655.t1 MNDSTYGPDQQCNTWSNGPSYPTSESVESNTPRTMCTRPYYNDAMPHDYTMRSNHNSTSDPFSRHTPCNGLTVQKRDIRN QSDLSTDIGQKMSNFRPMFPWMKNMKDIGRKRGRKTYTRHQTLELEKEFLYNRYLTRRRRQEIASALSLTERQNIYAYVL P |
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