Gene
| Gene Model ID | pfu_aug1.0_4229.1_59468 |
|---|---|
| Locus | scaffold4229.1 : 1 ... 10255 : - |
| To GenomeBrowser | scaffold4229.1:1..10255 |
| Genes list of scaffold | scaffold4229.1 |
| Synonym | pfu_aug2.0_11.1_03418 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4229.1_59468.t1 | 1 | 1 | Rcd1 | 31 | 221 | 0.0 | 345.2 | 0.0 | 0.0 | 344.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4229.1_59468.t1 | gi|291243415|ref|XP_002741589.1| | PREDICTED: cell differentiation protein RCD1 homolog [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4229.1_59468.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4229.1_59468.t1 atgcttcaagcagggggaggtaaccctggtcagacaggccaacagccacctgttgttttatcacaggtagaccgtgagaa gatttatttatggatcatagaattaacgagcccagaaactagagagaatgccctacaagaactcagcaaaaagcgtgagg tggtaccagacttagctcctatgctgtggcattcatttggaacagtggctgccctactccaggagatagtgaacatttac ccggccattaacccaccccacctcacggctcaccaatcaaacagagtgtgtaatgctctggcattgcttcagtgtgtggc ctcacacccagaaacaagatcagcatttctacaagcgcacattccgttgtttctgtacccatttcttcacactgtcagca agactcgcccctttgagtatctgcgtctgaccagtttaggagtgattggggcactagtcaagactgatgaacaagaagtt ataaacttccttctgacaacagaaatcatccctctgtgcctcagaataatggagtccggtagtgaactctccaaaactgt tgctacattcatactacagaagattttattggatgagaccggcttatcatatatatgtcaaacatatgaacgcttctctc acgtggccatgatactggtgactatatcttacttaaaatatatgtatttagttatgatttcatttcccttgaaatcaaag ctataa |
|
Protein
| Protein ID | pfu_aug1.0_4229.1_59468.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4229.1_59468.t1 MLQAGGGNPGQTGQQPPVVLSQVDREKIYLWIIELTSPETRENALQELSKKREVVPDLAPMLWHSFGTVAALLQEIVNIY PAINPPHLTAHQSNRVCNALALLQCVASHPETRSAFLQAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEV INFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDETGLSYICQTYERFSHVAMILVTISYLKYMYLVMISFPLKSK L |
|