Gene
| Gene Model ID | pfu_aug1.0_4230.1_16316 |
|---|---|
| Locus | scaffold4230.1 : 19216 ... 21354 : + |
| To GenomeBrowser | scaffold4230.1:19216..21354 |
| Genes list of scaffold | scaffold4230.1 |
| Synonym | pfu_aug2.0_3.1_10053 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4230.1_16316.t1 | 1 | 1 | AIG1 | 27 | 178 | 2.6e-18 | 65.9 | 7.9e-20 | 1.1e-16 | 60.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4230.1_16316.t1 | gi|47213898|emb|CAF95840.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 4.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4230.1_16316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4230.1_16316.t1 atgggaagtgactctctccttcaagcctcaatagctgaatttcttttacaacttcaaaactcatcgaacacttctccaag tgacaggtgtcatgtgacacacaatgttgttggtgacaaggacatcgttgtgataaatgctcctggcctacttgacggta atctgagtgaagaaaaattaaaactagaactacagcgtctatactttcagtcatccccaggtccgcacgtcatgctgtat gtaagtaagtgttacgaacgtgatatagacaaggctgtgtatgaaaggatggtcgccatctttggcaaggaattagtgga taggtctatttttgtatttcaggaatatggtgatatgatggatttttctttgtcaatgaggagaccggctaggtttaaaa gaaaagtaccggtatctcagagaactcgaaacgaacactctgaattactgagtaaaatagaggaggttgttcaagagtat aacggtacgtactttgtaaatgagatgctaagagaggcagaaaaatgtctccaagagcacacaaaaattctgctgtcgaa gactcaaactggaaaagaactggaaatgttaaaacaacagcttctggatatgaaatccaagcaggaagaggataagaaaa ggatagaagagttagaaggacgaatacatcaggcaactgaggcgagtaataaaacagaagtgactttgaggaaagaggag cgagataaatttatcaatgacgaaatgatgcagagagtgtatagaggacttatgtatgttagtgaaaaactcatattaca aggaattgttgtggtggttagatcctatctaggattttga |
|
Protein
| Protein ID | pfu_aug1.0_4230.1_16316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4230.1_16316.t1 MGSDSLLQASIAEFLLQLQNSSNTSPSDRCHVTHNVVGDKDIVVINAPGLLDGNLSEEKLKLELQRLYFQSSPGPHVMLY VSKCYERDIDKAVYERMVAIFGKELVDRSIFVFQEYGDMMDFSLSMRRPARFKRKVPVSQRTRNEHSELLSKIEEVVQEY NGTYFVNEMLREAEKCLQEHTKILLSKTQTGKELEMLKQQLLDMKSKQEEDKKRIEELEGRIHQATEASNKTEVTLRKEE RDKFINDEMMQRVYRGLMYVSEKLILQGIVVVVRSYLGF |
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