Gene
| Gene Model ID | pfu_aug1.0_4230.1_16317 |
|---|---|
| Locus | scaffold4230.1 : 21500 ... 25225 : - |
| To GenomeBrowser | scaffold4230.1:21500..25225 |
| Genes list of scaffold | scaffold4230.1 |
| Synonym | pfu_aug2.0_3.1_10052 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4230.1_16317.t1 | 1 | 1 | C1q | 28 | 151 | 6.5e-23 | 81.1 | 1.0e-26 | 7.8e-23 | 80.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4230.1_16317.t1 | gi|325504439|emb|CBX41719.1| | putative C1q domain containing protein MgC1q70 [Mytilus galloprovincialis] | 6.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4230.1_16317.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4230.1_16317.t1 atgatggggaagggatccgtctgtcttctacttatgtttgttacagtttccctatgccaggatatgaatgtagggaaagc tgctttcagtgcagtccggaatgagaaagcagttctaccaccgttttcagtgattatatttgatgaggtgacgacaaact accaaatggcttacaatgcctcaactggaaatttcaatgctccaagtaatggtatatacgtgttcacatggaccgtagcc accaaatggggacagtggcagacgacacaactcatgtgtaatgacgatgcgatagccaacattgtagctgatagttataa gaacggagatagaagtacagccactggtacaatggttctcagtcttcaagcaaacgatagggtgtacgtgagaaccggac gtcttggtgatcgcatgatcttaaaaaatatgttttgtaccttcagcggatggaagttatatgatttatag |
|
Protein
| Protein ID | pfu_aug1.0_4230.1_16317.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4230.1_16317.t1 MMGKGSVCLLLMFVTVSLCQDMNVGKAAFSAVRNEKAVLPPFSVIIFDEVTTNYQMAYNASTGNFNAPSNGIYVFTWTVA TKWGQWQTTQLMCNDDAIANIVADSYKNGDRSTATGTMVLSLQANDRVYVRTGRLGDRMILKNMFCTFSGWKLYDL |
|