Gene
| Gene Model ID | pfu_aug1.0_42448.1_55858 |
|---|---|
| Locus | scaffold42448.1 : 1 ... 4947 : + |
| To GenomeBrowser | scaffold42448.1:1..4947 |
| Genes list of scaffold | scaffold42448.1 |
| Synonym | pfu_aug2.0_348.1_27256 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_42448.1_55858.t1 | 1 | 1 | SBP_bac_3 | 1 | 149 | 4.7e-06 | 26.0 | 1.5e-09 | 2.2e-05 | 23.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_42448.1_55858.t1 | gi|291226397|ref|XP_002733179.1| | PREDICTED: uncharacterized protein LOC100368717 [Saccoglossus kowalevskii] | 7.0e-17 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_42448.1_55858.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_42448.1_55858.t1 agacaaagatggagttttgaaaggtgctgatttagatctgatacacgatgtatgcgagatagctggtcagaaatgtgagg ttacagtacagccatttaatgaatgcatcaaaacggaggaaggcaggttctttcctggaagaggaatcatggcaggatgg tttgacgcatgcgtagcgtacgtgtcatcacaggacagagtgaacgccatggactttacggatcccttcaggacagtggc gtccacgtttgctgtattaccaggaaaccccaaaggtttcgacccgaaaaggatttcagaatttgtagtcacacatttga atggtgcttttaccaatctacagtgtttagagagaataggactgggtaagcctaaaaaggttattgtagccagcggtata gtggaagcaaaggagctgatgttgaataaaactgctgatgctctattttcaccacgtagagcatttgacgagttggatgt attacctggtaattatgggtgtgacatcaatggtacaggtttccctatcaaagattgtctgcctaggccaaaatatacag aagatggaaaattgaaatttgaatcggttcgtggttga |
|
Protein
| Protein ID | pfu_aug1.0_42448.1_55858.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_42448.1_55858.t1 DKDGVLKGADLDLIHDVCEIAGQKCEVTVQPFNECIKTEEGRFFPGRGIMAGWFDACVAYVSSQDRVNAMDFTDPFRTVA STFAVLPGNPKGFDPKRISEFVVTHLNGAFTNLQCLERIGLGKPKKVIVASGIVEAKELMLNKTADALFSPRRAFDELDV LPGNYGCDINGTGFPIKDCLPRPKYTEDGKLKFESVRG |
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