Gene
| Gene Model ID | pfu_aug1.0_4245.1_44908 |
|---|---|
| Locus | scaffold4245.1 : 52826 ... 54753 : + |
| To GenomeBrowser | scaffold4245.1:52826..54753 |
| Genes list of scaffold | scaffold4245.1 |
| Synonym | pfu_aug2.0_314.1_13978 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4245.1_44908.t1 | 1 | 1 | Neur_chan_LBD | 2 | 182 | 9.0e-35 | 119.7 | 1.6e-38 | 1.2e-34 | 119.3 |
| pfu_aug1.0_4245.1_44908.t1 | 2 | 1 | Neur_chan_memb | 190 | 275 | 4.0e-13 | 49.8 | 3.0e-15 | 2.2e-11 | 44.1 |
| pfu_aug1.0_4245.1_44908.t1 | 2 | 2 | Neur_chan_memb | 309 | 341 | 4.0e-13 | 49.8 | 0.00033 | 2.4 | 7.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4245.1_44908.t1 | gi|301627564|ref|XP_002942944.1| | 4.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_4245.1_44908.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4245.1_44908.t1 atgaacgtaacgtttcagtctcatctattacgaatgatttatttggatgaaactggaagtgaactaaagacgtacatgag ttttgatgtgtattggactgacgagttgctccaatggaacacgacagactacgctggtattgaaaatatccaggtgtcgg tggatgatatttggcttccagacctcgtattagccaacggactgggagaacacaatgatctaccgagtcaacagtcagtt ctgaacattcatcataccggcggggtaagctgggcacccggtggtccattaaagacctactgcgacgtggacatcagtaa gtatccgtttgatacacaaacctgtgatttattcgttaagccctctatgctggactcaacaatgcaggtcctacgcccgt cagcgaagaaaccagaccctctggaccatttcactccagactcacagtgggacgttgttgatgctagtcaacattttcag actataaggaaacaacgtggtcttgaggagatacacttcaagcttatgctaattctaaggagaagaactctttattacat actgaacatgatttcaccagttgttttactagcgtttttgagtgtttgttgtttcatcatcccaccatcctgtggagaga aaatgacactctgcatctcaatattcctgacgtttgcagtgtacataacgataatcacagaagaaatgccacggtctact attggcatctctcgatttgggctattcctaacaagtcaacttatcctcagcgctctggcgattgttttgaattccgtcgt tctgcacgtataccacaaggaggaggaagtatgtggttgtgcttttctgaaagcgaagaaaagaggcaaccttgcctata tgagtaatgctgacagatcctcagaaaccatcatttccaatgacagttccaaatcaactgatgacaaatgctcaccgaat aaactgttggcaaacaaactggacagattcttcatgattatgtttctcctgttgaatattatatctttcgttgtttttgc atcatttttctaa |
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Protein
| Protein ID | pfu_aug1.0_4245.1_44908.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4245.1_44908.t1 MNVTFQSHLLRMIYLDETGSELKTYMSFDVYWTDELLQWNTTDYAGIENIQVSVDDIWLPDLVLANGLGEHNDLPSQQSV LNIHHTGGVSWAPGGPLKTYCDVDISKYPFDTQTCDLFVKPSMLDSTMQVLRPSAKKPDPLDHFTPDSQWDVVDASQHFQ TIRKQRGLEEIHFKLMLILRRRTLYYILNMISPVVLLAFLSVCCFIIPPSCGEKMTLCISIFLTFAVYITIITEEMPRST IGISRFGLFLTSQLILSALAIVLNSVVLHVYHKEEEVCGCAFLKAKKRGNLAYMSNADRSSETIISNDSSKSTDDKCSPN KLLANKLDRFFMIMFLLLNIISFVVFASFF |
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