Gene
| Gene Model ID | pfu_aug1.0_4245.1_44909 |
|---|---|
| Locus | scaffold4245.1 : 60176 ... 61768 : + |
| To GenomeBrowser | scaffold4245.1:60176..61768 |
| Genes list of scaffold | scaffold4245.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4245.1_44909.t1 | 1 | 1 | Neur_chan_LBD | 2 | 182 | 1.2e-33 | 116.1 | 2.2e-37 | 1.6e-33 | 115.6 |
| pfu_aug1.0_4245.1_44909.t1 | 2 | 1 | Neur_chan_memb | 190 | 275 | 4.6e-13 | 49.6 | 2.9e-15 | 2.2e-11 | 44.1 |
| pfu_aug1.0_4245.1_44909.t1 | 2 | 2 | Neur_chan_memb | 309 | 341 | 4.6e-13 | 49.6 | 0.00035 | 2.6 | 7.8 |
Transcript
| Transcript ID | pfu_aug1.0_4245.1_44909.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4245.1_44909.t1 atggacgtaacgtttcagtctcatctattacgaatgatttatttggatgaaactggaagtgaactaaagacgtacatgag ttttgatgtgtattggactgacgagttgctccaatggaacacgacagactacgctggtattgaaaatatccaggtgtcgg ttgatgatatttggcttccagacctcgtattagccaacggactgggagaacacaatgacctaccgagtcaacagtcagtt ctgaacattcatcataccggcggggtaagctgggcacccgggggtccattaaagacctactgcgacgtggatatcagtaa gtatccgtttgatacccaaatttgtgatttattcattaaaccttctatgctggactcaacaatgcaggtcctacgcccgt cagcgaagaaactaggtcctctagaccattttaatccggattcccaatgggacgtggttgatgctagtcaacattttcgg actataaagaagcaacgtggtcttgaggagataaacttcaggcttatgctaaagcttaagagacgaactctttattacat actgaatatgatttcaccagttgttttactagcgtttttgagtgtttgctgtttcatcatcccgccatcatgtggagaga aaatgacactctgcatctcaatattcctgacgtttgcagtgtacataacgataatcacagaagaaatgccacggtctact attggcatctctcgatttgggctattcttaaccagtcaacttatcctcagcgctctggcgattgttttgaattccgtcgt tctgcacgtataccacaaggaagaggaagtatgtggttgtgcttttctgaaagcgaagaaaagaggcaaccttgtctata tgagtaatgctgacagatcctcagaaaccattatttccaatgacagctccaaatcaactgatgacaaatgctcaccgaat aaactgttggcaaacaaactggacagattcttcatgattatgtttctcctgttgaatattatatctttcgttgtttttgc atcatttttctaa |
|
Protein
| Protein ID | pfu_aug1.0_4245.1_44909.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4245.1_44909.t1 MDVTFQSHLLRMIYLDETGSELKTYMSFDVYWTDELLQWNTTDYAGIENIQVSVDDIWLPDLVLANGLGEHNDLPSQQSV LNIHHTGGVSWAPGGPLKTYCDVDISKYPFDTQICDLFIKPSMLDSTMQVLRPSAKKLGPLDHFNPDSQWDVVDASQHFR TIKKQRGLEEINFRLMLKLKRRTLYYILNMISPVVLLAFLSVCCFIIPPSCGEKMTLCISIFLTFAVYITIITEEMPRST IGISRFGLFLTSQLILSALAIVLNSVVLHVYHKEEEVCGCAFLKAKKRGNLVYMSNADRSSETIISNDSSKSTDDKCSPN KLLANKLDRFFMIMFLLLNIISFVVFASFF |
|