Gene
| Gene Model ID | pfu_aug1.0_4246.1_01678 |
|---|---|
| Locus | scaffold4246.1 : 52637 ... 57495 : - |
| To GenomeBrowser | scaffold4246.1:52637..57495 |
| Genes list of scaffold | scaffold4246.1 |
| Synonym | pfu_aug2.0_653.1_11039 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4246.1_01678.t1 | 2 | 1 | DUF3504 | 140 | 290 | 1.7e-15 | 57.1 | 5.2e-19 | 7.7e-15 | 55.0 |
| pfu_aug1.0_4246.1_01678.t1 | 2 | 2 | DUF3504 | 342 | 379 | 1.7e-15 | 57.1 | 0.17 | 2500.0 | -2.0 |
Transcript
| Transcript ID | pfu_aug1.0_4246.1_01678.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4246.1_01678.t1 atggactctgacggaacggcgtttgaaattacaacagcaccaggcgaaagaaaacgtgaaatttctgtgaaagaattcaa tgaaataaatgatatgaaagcaggaaatggtgaaaatagagaaaaacaagccactcaacagaaagcactcttcctactgg acagagagactgaggagttggaccagggcatggagaacaagaatacattaagaaagaccgatactgatgtccgaattgtc attgcttacttaaaatccatccgggaaactcgaccaccagaactcatatctccaatagaactggacaaatacttgacaag cttctttggcactgcattaagatcgaaacaacaaaaactaagggaacatggaaaaggtgccaagaaactttcggaaaatt accgaagtttgtcatttgacaaaataaatgacttgtatgatgccaaagaaatgggaccttatacacccatgtcggtcatc aatacgctttgcttcaccatcatagttcacttccgtctaaggaaagcaattgatcacaaaaaccttctgtggggagacat caagctgaaatatgatcagagcggcaaagaatatcttcgctatgaacccatatcaacgctgcaaccccgttctctgagga aaatttctacaaaaggaggtaaaatatgcatcctgccaacatctctgaaagcagagaaagaccccatcaacatctataaa ctctacgccgagaagagaccatcaaatctgaactacgagaacgcccctttctatttaggcatcacaactatgtacccatc ctctatgcaggcttggtatcggacatgcgcaatgggagtcaacaagttaagtgaattggtcagaatgatccgagaaataa cgggactctcaaaagtacctgttgattatcccatcaaattgcccttgacgaacgaatattcaaaaattcaaattaacccg cctgtggaacttcaaggcacgacattggaagatagcttggaccgaaaggcagtcaaacaaaatggtatatcactaccgca tcgaaagtctaacaattgtgaacaggatacagatgatagctcttctaacttgtctctgtcaaacgatgatgacgacgaag atatttgggaagatgaatctatgagtaaatcttctgaagaagaaatgcttctatttttacttatagtcaatgtgagtaac cataccagtctaaacatgacaaaaacgtacttctctcagatgattcagcgtcttgacaacagtgacgtcattaaatttag agagtggctagcccaagtagaaatatgtactgatccaatcagaggtcatggtatctgtcgagaaaaattcggagacaaaa ttgtcaacaactttgaaaagacttcagatggttctgacttggtaaaagttgaaaggaaaatagatgcaaaacctgaagat ttgtcatctgccagaataaccttgaacatcacactgtctccgcgttctttactaggtaagggtccaataacagtaacagc gacttcaaataaagatttgaagcagtccacaggtcaagtggagactcaaaatgacagcaataagaaagagaagattaccc cagatccaggccaagccatcggaggtagcccaaacggcctgtctcctttgatgggaaagagaagccggtctatggatagt accccaatgaatttagtttgtcgtcaaaagtatccaaggaatcacttatataatggtggacagtttgatctatttcaaca tgggctaactgctgcagcgttgaaccttaaccaatcaaccataaatcaagggcacaacactttcaacagaatattggcca gtgccgtaccccctcttgctcactgcccatctaatcgggtgtatcagcgagaacatgtcgcagtacgttctgaaagcctc tcctgctctagacaacaaccgccatccgccattcttacagaaatgccgaaaagtattaatcgagttcacgaagaggaaac ctcgtccttgatttgtccacctcgaacagacgtcgacatttcatcgcagaccgtgtcaatatcatgcaacatttcgtcca ataagcattag |
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Protein
| Protein ID | pfu_aug1.0_4246.1_01678.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4246.1_01678.t1 MDSDGTAFEITTAPGERKREISVKEFNEINDMKAGNGENREKQATQQKALFLLDRETEELDQGMENKNTLRKTDTDVRIV IAYLKSIRETRPPELISPIELDKYLTSFFGTALRSKQQKLREHGKGAKKLSENYRSLSFDKINDLYDAKEMGPYTPMSVI NTLCFTIIVHFRLRKAIDHKNLLWGDIKLKYDQSGKEYLRYEPISTLQPRSLRKISTKGGKICILPTSLKAEKDPINIYK LYAEKRPSNLNYENAPFYLGITTMYPSSMQAWYRTCAMGVNKLSELVRMIREITGLSKVPVDYPIKLPLTNEYSKIQINP PVELQGTTLEDSLDRKAVKQNGISLPHRKSNNCEQDTDDSSSNLSLSNDDDDEDIWEDESMSKSSEEEMLLFLLIVNVSN HTSLNMTKTYFSQMIQRLDNSDVIKFREWLAQVEICTDPIRGHGICREKFGDKIVNNFEKTSDGSDLVKVERKIDAKPED LSSARITLNITLSPRSLLGKGPITVTATSNKDLKQSTGQVETQNDSNKKEKITPDPGQAIGGSPNGLSPLMGKRSRSMDS TPMNLVCRQKYPRNHLYNGGQFDLFQHGLTAAALNLNQSTINQGHNTFNRILASAVPPLAHCPSNRVYQREHVAVRSESL SCSRQQPPSAILTEMPKSINRVHEEETSSLICPPRTDVDISSQTVSISCNISSNKH |
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