Gene
| Gene Model ID | pfu_aug1.0_4246.1_01681 |
|---|---|
| Locus | scaffold4246.1 : 81229 ... 90300 : - |
| To GenomeBrowser | scaffold4246.1:81229..90300 |
| Genes list of scaffold | scaffold4246.1 |
| Synonym | pfu_aug2.0_1051.1_04791 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4246.1_01681.t1 | 3 | 1 | WD40 | 1 | 14 | 4.1e-07 | 29.6 | 3.3e-06 | 0.024 | 14.5 |
| pfu_aug1.0_4246.1_01681.t1 | 3 | 2 | WD40 | 19 | 52 | 4.1e-07 | 29.6 | 2.8e-06 | 0.021 | 14.7 |
| pfu_aug1.0_4246.1_01681.t1 | 3 | 3 | WD40 | 103 | 135 | 4.1e-07 | 29.6 | 0.17 | 1200.0 | -0.5 |
| pfu_aug1.0_4246.1_01681.t1 | 2 | 1 | DUF3337 | 115 | 259 | 0.0 | 163.4 | 1.0e-22 | 7.6e-19 | 68.2 |
| pfu_aug1.0_4246.1_01681.t1 | 2 | 2 | DUF3337 | 260 | 351 | 0.0 | 163.4 | 1.6e-30 | 1.2e-26 | 93.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4246.1_01681.t1 | gi|194379360|dbj|BAG63646.1| | unnamed protein product [Homo sapiens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4246.1_01681.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4246.1_01681.t1 tgtctgtcaggtagttcagacggtacaatacgtttatggtctctgggccagcaaagatgtgtagctacattccgtgtaca tgacgagggggtatgggcattacaagctaacgacagcttctccacggtgtattctggcggtagagatcgtaggatatggg ccacagatatacggaaccctgagtacagagctctcatctgtgaggaacaggcgccagtattaaagccgttacagaaagtt agtgctttatcgtccagagattatgacaacgacaatttaaaacctctctattcacaaccagaatacactataaaaggtgg atcaagcatacggcagtactatgtcctcaatgacaaacgtcacatactgaccaaagacaccgatgacaatgttgcattat gggatgtgctaacggctagaaaagtagaagatctaaagaaagtggactttgaagaacagataaggaaattgttcaaaatg gtgtatgtacctaactggttcactgtggatcttaagacagggttgctgacgatccatttagacgagtcagattgtttctc agcgtggatgtcggctagggaactagggatgatatcatcacaggagggcacagacaccaaattgaacatgggccagcagt tattacaagctctattagaacactggccaaagcatcatacatatgagtctcaagatggtatgaacggtatgatggagaat ggtgatggtgcaccattttttacagtaccaggacacactccggtcatattttgagataggttatcagccagtgatatgat acaagtcagaaaagtcatagaacacgtgtacgagaaagtcttaggtcagggatctgaaaacggctcccagaatgcatctg gaggaagtcaggaacgagaggaaagtgaaaaagaggctacagacttatcatcgatagctgaagagaaagtagaattatta tgtaatgatcaggttttagatgcaaatatggatttaaggacagttaaacattttatctggaagcaaacgggtgatcttac gttacattatagaccgatagtaaaatga |
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Protein
| Protein ID | pfu_aug1.0_4246.1_01681.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4246.1_01681.t1 CLSGSSDGTIRLWSLGQQRCVATFRVHDEGVWALQANDSFSTVYSGGRDRRIWATDIRNPEYRALICEEQAPVLKPLQKV SALSSRDYDNDNLKPLYSQPEYTIKGGSSIRQYYVLNDKRHILTKDTDDNVALWDVLTARKVEDLKKVDFEEQIRKLFKM VYVPNWFTVDLKTGLLTIHLDESDCFSAWMSARELGMISSQEGTDTKLNMGQQLLQALLEHWPKHHTYESQDGMNGMMEN GDGAPFFTVPGHTPVIFXDRLSASDMIQVRKVIEHVYEKVLGQGSENGSQNASGGSQEREESEKEATDLSSIAEEKVELL CNDQVLDANMDLRTVKHFIWKQTGDLTLHYRPIVK |
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