Gene
| Gene Model ID | pfu_aug1.0_4268.1_23536 |
|---|---|
| Locus | scaffold4268.1 : 988 ... 26962 : + |
| To GenomeBrowser | scaffold4268.1:988..26962 |
| Genes list of scaffold | scaffold4268.1 |
| Synonym | pfu_aug2.0_149.1_30295 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4268.1_23536.t1 | 6 | 1 | LRR_4 | 74 | 94 | 8.2e-17 | 60.4 | 0.24 | 600.0 | 0.2 |
| pfu_aug1.0_4268.1_23536.t1 | 6 | 2 | LRR_4 | 99 | 126 | 8.2e-17 | 60.4 | 1.0e-06 | 0.0026 | 17.3 |
| pfu_aug1.0_4268.1_23536.t1 | 6 | 3 | LRR_4 | 147 | 157 | 8.2e-17 | 60.4 | 0.54 | 1300.0 | -0.9 |
| pfu_aug1.0_4268.1_23536.t1 | 6 | 4 | LRR_4 | 575 | 614 | 8.2e-17 | 60.4 | 1.4e-09 | 3.4e-06 | 26.5 |
| pfu_aug1.0_4268.1_23536.t1 | 6 | 5 | LRR_4 | 619 | 651 | 8.2e-17 | 60.4 | 1.7e-09 | 4.1e-06 | 26.2 |
| pfu_aug1.0_4268.1_23536.t1 | 6 | 6 | LRR_4 | 666 | 698 | 8.2e-17 | 60.4 | 0.042 | 100.0 | 2.6 |
Transcript
| Transcript ID | pfu_aug1.0_4268.1_23536.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4268.1_23536.t1 atgaaatttaaccaatgggtcctaagccataacaatgggccccagcaaaaatcaatgcgtcccaagtactgtaaacagtc tcttttcgtcttaaattcgcgaatacaatgtttggcaaatggagttaatttcaacaagatacagtctggagaaccgtcca atatcgagctgctggagttatttttctccaactatccgcgcatagtgcacatgcacttatttccatgtcttacttccctt tgcttggtgggacaaccaatacagaaaataaacggcttagacagcctacatgtgctgaaagaactctggatgtgtgaatg tcagattaaggacttgacacacttgatgaggttacccaagttgataagcctgagtttgaaggactcggtatactctcccg cccccgtcagtctgctgtgtaattactccacacacgtgctgtaccacctacctaacctcacacgactagacacctacgac atcagtaaaaccgtcagtgacctagcagaggcaacagtgaccaagaagaaaatgtactataacatgagagtgaaaacagt taggaggaatatggcagagatactaaccaaaatggcgacgtataaaagccgactcctagaatacccgagtgaaagaatga aagtattgatgaattgtatcaaggaggtacggaaacactttgaggaattgatgacggaaaacatggattttagtctatta gccgatatggatgacaatttgttgattgttgatgccgtagaagacaagagcagactacagcagctggatgaggatggcag gtttacattaaagatggcggctttaaaggaaagaatgaagaaatgggagagcaaatttacagaggtcgatagctatcatc aagaagctatgaatagagtgaacttcacaggagaaactttagtacggcggatgactatagagctggaatctggaggaaat gtgagattcgaagagggatccccatctgacgtatggttctcctcatgccatgatcttgtcctgtcacggttttgtgcatc cgattacaaggagcacgggattgcaggggtaaaaattcacaggatcatacgggttcacaacagaatgttacgcaatagat ttgacgagaagttaacgtccatcgtcgatgatgtagacggagagtattatcctagtctaagtgtagagatgacatttcat tattgtaggaaccactcatacaagaaacttctggagtatttattctggatgtgggatcctaacttaccgggaggcgaaca tgaagcttgtcgggtgctagaagatggcttcatggacgcagaatcgtacaagggtttaggacagttgattatatccaaag tcttcctaggaaaaagtgtcaaagctgtggatgaaaggccatggggacgcctacacagttgtgagtgcagtacgcggcag tgtgagtggtatatctttgataatgagttggttctaccggaatacatagtggagtttgaatatgttactaagttcaggtc gaaatctccctttgcacccttcaatgatgtattgttagataatagggaatgtaaaataccagcggtacctcatgtagagg acgacaaggcggccgataatgatgtcatagatatggagccgatggttaaaccaagacctcgaataacagtactgaatgaa gatttgattttgagagctgctggagctgaagcttttgaacatattacagtgctaaatcttcatgataatggactgacgaa ggtcaaacccctacatgctcttaaagagctcaaaaggcttacactgagctttaatgagcttaccaggcttgatgaacttt cacacatgggtatagagtttcttgatgctagtttcaacaacatagaaactctagaaggcctcaagaatgtacagaagttg aaattcctcgacctgagctggaacaaactcagtaggactcgtgaggagctgtccataatgaggaagcatacctccaacct tttaagtctggacatacgtcataatacatggcttaagccagagaatttacgcctgagggtaataggtcgtttgaagtcct tgaccctcctggatgggtcagcagtgacagagattgaggccacggcagccttgagggtggcagcagggtcaaggatatcc cagctttctctcctcacacattcacggacggacaatcaccgccctcgatcactcaatctgttatctacggcacagatcat ggagaggtacagcaggttacggccagagaaagtcggagacaatgacaaccattggtacacaaaggtagtatcctga |
|
Protein
| Protein ID | pfu_aug1.0_4268.1_23536.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4268.1_23536.t1 MKFNQWVLSHNNGPQQKSMRPKYCKQSLFVLNSRIQCLANGVNFNKIQSGEPSNIELLELFFSNYPRIVHMHLFPCLTSL CLVGQPIQKINGLDSLHVLKELWMCECQIKDLTHLMRLPKLISLSLKDSVYSPAPVSLLCNYSTHVLYHLPNLTRLDTYD ISKTVSDLAEATVTKKKMYYNMRVKTVRRNMAEILTKMATYKSRLLEYPSERMKVLMNCIKEVRKHFEELMTENMDFSLL ADMDDNLLIVDAVEDKSRLQQLDEDGRFTLKMAALKERMKKWESKFTEVDSYHQEAMNRVNFTGETLVRRMTIELESGGN VRFEEGSPSDVWFSSCHDLVLSRFCASDYKEHGIAGVKIHRIIRVHNRMLRNRFDEKLTSIVDDVDGEYYPSLSVEMTFH YCRNHSYKKLLEYLFWMWDPNLPGGEHEACRVLEDGFMDAESYKGLGQLIISKVFLGKSVKAVDERPWGRLHSCECSTRQ CEWYIFDNELVLPEYIVEFEYVTKFRSKSPFAPFNDVLLDNRECKIPAVPHVEDDKAADNDVIDMEPMVKPRPRITVLNE DLILRAAGAEAFEHITVLNLHDNGLTKVKPLHALKELKRLTLSFNELTRLDELSHMGIEFLDASFNNIETLEGLKNVQKL KFLDLSWNKLSRTREELSIMRKHTSNLLSLDIRHNTWLKPENLRLRVIGRLKSLTLLDGSAVTEIEATAALRVAAGSRIS QLSLLTHSRTDNHRPRSLNLLSTAQIMERYSRLRPEKVGDNDNHWYTKVVS |
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