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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4271.1_01687
Locus scaffold4271.1 : 43269 ... 74015 : -
To GenomeBrowser scaffold4271.1:43269..74015
Genes list of scaffold scaffold4271.1
Synonym pfu_aug2.0_2882.1_09005

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4271.1_01687.t1 3 1 FAT 8 177 0.0 170.6 0.0 0.0 161.2
pfu_aug1.0_4271.1_01687.t1 3 2 FAT 177 199 0.0 170.6 3.4e-07 0.001 18.1
pfu_aug1.0_4271.1_01687.t1 1 1 Rapamycin_bind 273 344 6.9e-13 48.5 6.7e-16 2.0e-12 47.0
pfu_aug1.0_4271.1_01687.t1 3 3 FAT 277 318 0.0 170.6 0.54 1600.0 -2.3
pfu_aug1.0_4271.1_01687.t1 2 1 PI3_PI4_kinase 414 489 6.0e-22 78.2 1.6e-17 4.7e-14 52.4
pfu_aug1.0_4271.1_01687.t1 2 2 PI3_PI4_kinase 499 542 6.0e-22 78.2 1.1e-08 3.3e-05 23.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4271.1_01687.t1 gi|197131003|gb|ACH47049.1| target of rapamycin [Blattella germanica] 0.0

Transcript
Transcript IDpfu_aug1.0_4271.1_01687.t1
Definition-
>pfu_aug1.0_4271.1_01687.t1
atggctggcgagagttataaccgggcttatgggggatgtcagcgtgtggtcgaggattggcagaaaatcatacaagtcag
atcactggttgtgtcccctgtagaggacatgaaaacatggctgaaatatgcgagtttgtgccgaaaaagtggacgattgg
ctctatcccataaaacccttgtaatgctgctgggtatcgacccatcaaaaatgccggcagatcagaccattcccaccacc
aatccacaggtcacgtttgcctatatgaaacacatgtggaaaaacaatcagaagggtgaagccttccacaaacttcagta
ttttgtacaaaactcgctgcatgctcgagctttacaactcgtgtctcctgaagactcttatgagagagcagaactcaata
aactattggcaaggtgtaacttgaagctcggagactgggcacaagaccagcttggcgtaaacgaaaagtcgataagtgaa
gtacttgagtattataccaggtccacagaatatgataaaaactggtacaagggattcttccgttctattgccttgtcaca
acatagcagtctacaagatacactaaggttacttaccctactgtttgactatggacaatggccggaggtttatgaagcta
taaatgatggtttaaagactatacagatccaacattggctacaggtgattcctcaattgattgcacgtattgacacacca
cgccatctagtggccaggttaatatcacagctcctcatagatgtcggcaagtcacacccccaggctctgatttatcccct
tactgtagcatccaagtcaaacgcccaggcgcgacaaaacgccgctaataaagtactgaagagtatgtgtgagcacagca
atactcttgtacaacaagctatgctggcttatggcagagatcttatggaggcgcaggattggtgtaagaaatatcagaga
tccggtaacgttaaggatctcacccaggcttgggatctgtactaccacgtgttccgcaggatctccaaacagcttccaca
gctgacatcactggagcttcagtacgtatcccccaagttactccgctgtcaggaattagagttagccgtaccggggacgt
atgaacctaatcaaccaatcgtcaaaatcagacgggtccaagcctccctacaagttataacatcgaaacaaagacccaga
aagctcagtatatttgggagcaatggaatggagtttatgttcttactgaagggacatgaagacttaaggcaggatgaaag
ggtcatgcagctctttggtcttgtcaactctctgctactgaataatcccgaaacattccgcaggaatctgactatccata
ggttttctgtgatccctctgtctacgaactctggactgattggatgggtaccacacacagacactttacattcccttatc
agagattacagagaaaagaaaaagattcttctaaatatagaacacagactgatgctcagggtgacgggtatagagggtaa
ttatcgtatgacctgtgagagtgtaatggaggtgttacgtgaacacaaggacagtctgatggccgtgttagaggcatttg
tctacgatcctctacttaactggagactgatggacattggatccttgcaggtgttggaaaatataaatctttccatttga

Protein
Protein IDpfu_aug1.0_4271.1_01687.t1
Definition-
>pfu_aug1.0_4271.1_01687.t1
MAGESYNRAYGGCQRVVEDWQKIIQVRSLVVSPVEDMKTWLKYASLCRKSGRLALSHKTLVMLLGIDPSKMPADQTIPTT
NPQVTFAYMKHMWKNNQKGEAFHKLQYFVQNSLHARALQLVSPEDSYERAELNKLLARCNLKLGDWAQDQLGVNEKSISE
VLEYYTRSTEYDKNWYKGFFRSIALSQHSSLQDTLRLLTLLFDYGQWPEVYEAINDGLKTIQIQHWLQVIPQLIARIDTP
RHLVARLISQLLIDVGKSHPQALIYPLTVASKSNAQARQNAANKVLKSMCEHSNTLVQQAMLAYGRDLMEAQDWCKKYQR
SGNVKDLTQAWDLYYHVFRRISKQLPQLTSLELQYVSPKLLRCQELELAVPGTYEPNQPIVKIRRVQASLQVITSKQRPR
KLSIFGSNGMEFMFLLKGHEDLRQDERVMQLFGLVNSLLLNNPETFRRNLTIHRFSVIPLSTNSGLIGWVPHTDTLHSLI
RDYREKKKILLNIEHRLMLRVTGIEGNYRMTCESVMEVLREHKDSLMAVLEAFVYDPLLNWRLMDIGSLQVLENINLSI

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