Gene
| Gene Model ID | pfu_aug1.0_42724.1_05228 |
|---|---|
| Locus | scaffold42724.1 : 1 ... 4384 : - |
| To GenomeBrowser | scaffold42724.1:1..4384 |
| Genes list of scaffold | scaffold42724.1 |
| Synonym | pfu_aug2.0_31.1_03453 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_42724.1_05228.t1 | 2 | 1 | Tho2 | 90 | 131 | 4.2e-26 | 91.6 | 4.3e-15 | 3.2e-11 | 42.8 |
| pfu_aug1.0_42724.1_05228.t1 | 2 | 2 | Tho2 | 138 | 201 | 4.2e-26 | 91.6 | 2.3e-16 | 1.7e-12 | 47.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_42724.1_05228.t1 | gi|260812219|ref|XP_002600818.1| | hypothetical protein BRAFLDRAFT_214991 [Branchiostoma floridae] | 6.00036e-42 |
Transcript
| Transcript ID | pfu_aug1.0_42724.1_05228.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_42724.1_05228.t1 atgcagctgagtacagaggagttcgttaaacgacttcctagtatagacactctcatgtctagctaccacattcctgcaga ctcggctttcttcttgagtagacctcagtatgcatacgcaatcagctccaggtttgaagaactgaggaaaattgacaaga gtaataaacaaggaggcagtcagttaaaattacagagatttattgaagcgtcagaggagatgatgcagcctgtgatagag cttattcgtcctttatattcatcaagggtgtgggaagatctcagtccacagttttatgtgacgttttggtccctacagat gtatgacctttttgtaccgaccagtgtatatgagaagcagattcagcagttacaagctcaggcttcagccgccgaggaca acaaagacttggcaatggtagcttgtttggagtctggtaactacatacagatacgcaatgctctcattgttctcacaaag attttaccaaactatcctaagataacccagtttggtcaagctctagagagacgagtagacagactgaggcaagaagaaaa agagaaaagacctgatatctatgcactagccatggggttggtatcttttgttattaaatga |
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Protein
| Protein ID | pfu_aug1.0_42724.1_05228.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_42724.1_05228.t1 MQLSTEEFVKRLPSIDTLMSSYHIPADSAFFLSRPQYAYAISSRFEELRKIDKSNKQGGSQLKLQRFIEASEEMMQPVIE LIRPLYSSRVWEDLSPQFYVTFWSLQMYDLFVPTSVYEKQIQQLQAQASAAEDNKDLAMVACLESGNYIQIRNALIVLTK ILPNYPKITQFGQALERRVDRLRQEEKEKRPDIYALAMGLVSFVIK |
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