Gene
| Gene Model ID | pfu_aug1.0_428.1_07528 |
|---|---|
| Locus | scaffold428.1 : 25 ... 7976 : + |
| To GenomeBrowser | scaffold428.1:25..7976 |
| Genes list of scaffold | scaffold428.1 |
| Synonym | pfu_aug2.0_171.1_03738 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_428.1_07528.t1 | 3 | 1 | Ank_2 | 3 | 51 | 1.3e-27 | 95.9 | 0.00026 | 0.65 | 10.3 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 1 | Ank_5 | 3 | 35 | 3.2e-12 | 46.2 | 0.0043 | 11.0 | 6.4 |
| pfu_aug1.0_428.1_07528.t1 | 4 | 1 | Ank | 4 | 17 | 1.0e-13 | 50.3 | 0.3 | 740.0 | 0.2 |
| pfu_aug1.0_428.1_07528.t1 | 4 | 2 | Ank | 28 | 48 | 1.0e-13 | 50.3 | 0.22 | 550.0 | 0.6 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 1 | Ank_3 | 33 | 48 | 1.4e-10 | 40.3 | 0.94 | 2300.0 | -0.6 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 2 | Ank_2 | 172 | 246 | 1.3e-27 | 95.9 | 1.9e-17 | 4.7e-14 | 52.4 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 2 | Ank_5 | 183 | 220 | 3.2e-12 | 46.2 | 5.6e-07 | 0.0014 | 18.8 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 1 | Ank_4 | 183 | 203 | 4.2e-09 | 36.6 | 0.0018 | 4.5 | 7.9 |
| pfu_aug1.0_428.1_07528.t1 | 4 | 3 | Ank | 185 | 213 | 1.0e-13 | 50.3 | 3.6e-07 | 0.00088 | 18.9 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 2 | Ank_3 | 185 | 206 | 1.4e-10 | 40.3 | 3.1e-06 | 0.0077 | 16.3 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 3 | Ank_2 | 187 | 274 | 1.3e-27 | 95.9 | 6.3e-18 | 1.6e-14 | 54.0 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 2 | Ank_4 | 187 | 234 | 4.2e-09 | 36.6 | 2.1e-08 | 5.1e-05 | 23.6 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 3 | Ank_5 | 215 | 256 | 3.2e-12 | 46.2 | 1.3e-08 | 3.1e-05 | 24.0 |
| pfu_aug1.0_428.1_07528.t1 | 4 | 4 | Ank | 216 | 247 | 1.0e-13 | 50.3 | 1.2e-10 | 3.0e-07 | 29.8 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 3 | Ank_3 | 216 | 243 | 1.4e-10 | 40.3 | 2.7e-08 | 6.7e-05 | 22.7 |
| pfu_aug1.0_428.1_07528.t1 | 3 | 3 | Ank_4 | 216 | 252 | 4.2e-09 | 36.6 | 4.2e-07 | 0.001 | 19.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_428.1_07528.t1 | gi|323526013|ref|YP_004228166.1| | 3.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_428.1_07528.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_428.1_07528.t1 atgtcaataattaatggaaacgacgagatcctgacggatattttacaatatgaccatacaaccaatctatacacagagtc tggacagacagcaagggaactagccgtccaatacaacaggaaaactacaatatcaataatgctggtgcatctgtctaacc gagccaagcataagaatgaggagagagtaaatgagttaaagaagatcctgacgaaaatttcaacagcactcacaatagag caccaaattgaacatcgacggacccctagcaagctagaggctttaaaagagcttgtgcatgtaatcgacgaatttgaaaa gaatgaagccaaggataaccagtttgcagacgcctttcacttggccagcaacagaatggtcaaatgtgtacacgcagaaa tacagaaagaaatagatagtataaataaaacggaggatgtaagaataaagccatacctagtttctgcatatacaggaaat cttcaaggtgttcacgatttcatccaccaaaggggtgtagaagaagtcgtagcaaacaaagatgatttggtgacaggtct acactgtgcatgtctcggtggacacgacgatatagtacacttacttctaaaacaccaccatcctgtagactgccaaacaa tggcgggatatactcctctattttacgccgctagagccaatttaatttcaatagtagatacattgatggagcatggtgct gatatacacatcaagaataagatgggttgtacagcatggctatacgcgaaggtcgagaagaataacgagttagctaacct tttatcaagtttaaaagctaaaaaacttgaacttgctaagaatgaaaaactcaaaggcggaaatttcagctgttcattgt cctaa |
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Protein
| Protein ID | pfu_aug1.0_428.1_07528.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_428.1_07528.t1 MSIINGNDEILTDILQYDHTTNLYTESGQTARELAVQYNRKTTISIMLVHLSNRAKHKNEERVNELKKILTKISTALTIE HQIEHRRTPSKLEALKELVHVIDEFEKNEAKDNQFADAFHLASNRMVKCVHAEIQKEIDSINKTEDVRIKPYLVSAYTGN LQGVHDFIHQRGVEEVVANKDDLVTGLHCACLGGHDDIVHLLLKHHHPVDCQTMAGYTPLFYAARANLISIVDTLMEHGA DIHIKNKMGCTAWLYAKVEKNNELANLLSSLKAKKLELAKNEKLKGGNFSCSLS |
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