Gene
| Gene Model ID | pfu_aug1.0_428.1_07531 |
|---|---|
| Locus | scaffold428.1 : 80311 ... 90135 : - |
| To GenomeBrowser | scaffold428.1:80311..90135 |
| Genes list of scaffold | scaffold428.1 |
| Synonym | pfu_aug2.0_171.1_03735 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_428.1_07531.t1 | 2 | 1 | Helicase_C_2 | 8 | 51 | 5.0e-13 | 49.3 | 5.7e-16 | 2.8e-12 | 46.8 |
| pfu_aug1.0_428.1_07531.t1 | 2 | 2 | Helicase_C_2 | 76 | 116 | 5.0e-13 | 49.3 | 0.09 | 440.0 | 0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_428.1_07531.t1 | gi|123235109|emb|CAM26418.1| | 3.0e-27 |
Transcript
| Transcript ID | pfu_aug1.0_428.1_07531.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_428.1_07531.t1 atgacagtatgtgggtacccgatggtgagtgaaggacttgacttctctgatgacaatggtcgtgctgtcattattaccgg tctaccttacccaccgagaatggatcctaaagtcaacctcaaaatgcagtttctggatgaaatgaggaacaaaaacaagt tcaagcttcctttatgggtgaaacctcatgttaaaaattatgatatgtttggaaagattattaaagacgtcattgttttc ttcaagactacagagctgaagctgtcaaaaacatctgacatgaagaaaatgccaggaagaaagaagatcatagtcaagaa gaaagatgattcatcagaagttgtgatgtcgaagcaatttgaaaatgtaacgacagtgaaaaagaacttgaaaacagctg aggaatatattcaagagataaagaaaagattgagtaaggaacagtataaagaattttctactgctcttgtaagctacaag tcaagtggagattttggaaagtttgccacacttttggtccgtctgtttactagaaaagaagaggatttcaatgttctcag acagttttatcgtttcattagaccaaaggacaaagagagatttaatgagttatgtcgggacctaacaggatcgagctgtg gttataagcctgaagatggcatatcaagaaaacgtgtactaacagatactgaaaacataggttcatcttcagatcagata caaccagagaaacgtttgagagggatcacagaaaatgtggaagtgaacacttgtacgaaatcagactgcacagttaatgt tttgggatctacatgtacagtcactcaaactgaaagtctgaaaaactgtgatacattacaaaatacaagcgtgactgtga atgacaatgatgggccttcatcacaaaaactacatgaaaacagagatccctctactagacctgcagaagatacaggtgat gtgtattcataa |
|
Protein
| Protein ID | pfu_aug1.0_428.1_07531.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_428.1_07531.t1 MTVCGYPMVSEGLDFSDDNGRAVIITGLPYPPRMDPKVNLKMQFLDEMRNKNKFKLPLWVKPHVKNYDMFGKIIKDVIVF FKTTELKLSKTSDMKKMPGRKKIIVKKKDDSSEVVMSKQFENVTTVKKNLKTAEEYIQEIKKRLSKEQYKEFSTALVSYK SSGDFGKFATLLVRLFTRKEEDFNVLRQFYRFIRPKDKERFNELCRDLTGSSCGYKPEDGISRKRVLTDTENIGSSSDQI QPEKRLRGITENVEVNTCTKSDCTVNVLGSTCTVTQTESLKNCDTLQNTSVTVNDNDGPSSQKLHENRDPSTRPAEDTGD VYS |
|