Gene
| Gene Model ID | pfu_aug1.0_4294.1_66935 |
|---|---|
| Locus | scaffold4294.1 : 28462 ... 52109 : - |
| To GenomeBrowser | scaffold4294.1:28462..52109 |
| Genes list of scaffold | scaffold4294.1 |
| Synonym | pfu_aug2.0_1012.1_08096 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4294.1_66935.t1 | 2 | 1 | Ig_2 | 17 | 101 | 7.2e-14 | 51.6 | 4.1e-12 | 7.6e-09 | 35.5 |
| pfu_aug1.0_4294.1_66935.t1 | 2 | 1 | I-set | 19 | 103 | 2.8e-30 | 104.0 | 1.1e-22 | 2.0e-19 | 69.1 |
| pfu_aug1.0_4294.1_66935.t1 | 2 | 1 | Ig_3 | 21 | 90 | 9.3e-11 | 42.0 | 2.8e-07 | 0.00052 | 20.4 |
| pfu_aug1.0_4294.1_66935.t1 | 2 | 1 | V-set | 21 | 92 | 6.2e-09 | 35.7 | 1.1e-08 | 2.0e-05 | 24.4 |
| pfu_aug1.0_4294.1_66935.t1 | 3 | 1 | ig | 36 | 88 | 9.3e-06 | 25.6 | 2.2e-07 | 0.00041 | 20.4 |
| pfu_aug1.0_4294.1_66935.t1 | 2 | 2 | Ig_2 | 94 | 159 | 7.2e-14 | 51.6 | 6.6e-06 | 0.012 | 15.6 |
| pfu_aug1.0_4294.1_66935.t1 | 2 | 2 | Ig_3 | 94 | 155 | 9.3e-11 | 42.0 | 1.0e-06 | 0.0019 | 18.6 |
| pfu_aug1.0_4294.1_66935.t1 | 2 | 2 | I-set | 97 | 164 | 2.8e-30 | 104.0 | 3.2e-13 | 5.9e-10 | 38.8 |
| pfu_aug1.0_4294.1_66935.t1 | 3 | 2 | ig | 106 | 118 | 9.3e-06 | 25.6 | 0.32 | 590.0 | 0.6 |
| pfu_aug1.0_4294.1_66935.t1 | 2 | 2 | V-set | 120 | 160 | 6.2e-09 | 35.7 | 0.00045 | 0.83 | 9.5 |
| pfu_aug1.0_4294.1_66935.t1 | 3 | 3 | ig | 147 | 153 | 9.3e-06 | 25.6 | 0.69 | 1300.0 | -0.4 |
Transcript
| Transcript ID | pfu_aug1.0_4294.1_66935.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4294.1_66935.t1 atgcactttatttcccgctaaatcctcaacttcaggtgattccccgaagttagatgaaataagagatgtttcagtacatg aaggtaccaagctcgtgttgaagacaaaagtaacagggtacccgaagccgaagataacttggtacaaagacaaagcaaga atccacaggtccaaacacgtcatcaaaacattcaatgcctcaacagcacgactgaagattaaggacataactgttaacga aagcggaaactattgttgtgttgcagaaaatcaagaagggcgatgtactattgaagttaaagttaaagttataggtgttc cggaaccaatgattacttggaaaagaaatgaaaaagaaatacgaagagacggaatatttaagcttagaaagtgtggctcc aatgtgtccctgaaaataactgacaaaaaagaatttaaaggaacttttacctgtgtcgcagaaaataccgtaggaactac caaagtgcaaattgaatcagaagatgctgtacaaagtggagggaaaggaagaataccaataccaaccacatcagtatcag aaaaagaaaggaaatattggaaaatgaggatcgacgatattctcaatttcaagaaaaacgagctcacagtaacggaacag gatgatctgagtgcaaaactcaaggatttgcgcaacaaagtgtttttcggattcattcttataaatgcgatatattttac tttcgtcttcacccttacgcaagccgacgctacattcaaccagatatcaaataattcagacagatcctttgcatcaactt ttcgatatacgtcgcataaacgaaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_4294.1_66935.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4294.1_66935.t1 CTLFPAKSSTSGDSPKLDEIRDVSVHEGTKLVLKTKVTGYPKPKITWYKDKARIHRSKHVIKTFNASTARLKIKDITVNE SGNYCCVAENQEGRCTIEVKVKVIGVPEPMITWKRNEKEIRRDGIFKLRKCGSNVSLKITDKKEFKGTFTCVAENTVGTT KVQIESEDAVQSGGKGRIPIPTTSVSEKERKYWKMRIDDILNFKKNELTVTEQDDLSAKLKDLRNKVFFGFILINAIYFT FVFTLTQADATFNQISNNSDRSFASTFRYTSHKRK |
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