Gene
| Gene Model ID | pfu_aug1.0_43058.1_27021 |
|---|---|
| Locus | scaffold43058.1 : 1 ... 11955 : - |
| To GenomeBrowser | scaffold43058.1:1..11955 |
| Genes list of scaffold | scaffold43058.1 |
| Synonym | pfu_aug2.0_7771.1_06308 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_43058.1_27021.t1 | 2 | 1 | zf-B_box | 16 | 58 | 7.7e-13 | 48.1 | 2.5e-08 | 6.1e-05 | 22.8 |
| pfu_aug1.0_43058.1_27021.t1 | 2 | 2 | zf-B_box | 74 | 112 | 7.7e-13 | 48.1 | 6.0e-13 | 1.5e-09 | 37.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_43058.1_27021.t1 | gi|344269782|ref|XP_003406726.1| | 3.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_43058.1_27021.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_43058.1_27021.t1 atgagtgacaatggagcctcagtgattcctccccagacatttgtggagtgtggccaatgtaaagggaacgtcaacatatc atggttttgtaaaaactgtccttgctcactttgtgacacatgcgctaccgcccacaagacaactcaacaatacaaatccc acacagtcgtgtcacggacatacaccgtcctccgattgtacggtccggcaaaattagcagaacaatgtcacatccatcca gaaaaagaaatatcatcttactgcaatgattgcggcattccatgctgtgtcacgtgtatggtgaacgatcataaacgtca tgagttctccaccatagaagacaagtacctggatacagaaaaaggcttgaatgagtactacagacagctggacaccgaca tcagaccaacgcttgaaacgatggaggaacaagcaagagcggatgtcaaggaagatgacagccatgttgagaaagtcata gatgacattaatatttttcgcaaagatgttgttcaaaattttaatagagcatgtgatgatctcattgttcaggttcgttc gttttcaagtaaaacaaatgaagggttgaaagaaattgaaacctcactaaaaaatcttgaaatcataaagaaagaaattg aagaaaaaatagcaaggggaaatttaaacctaattaaatatacacctcccaaaatggatacacttgttcccaaattgaaa ggtccatcaaaggttgtcccaatttttgaaccttgcaggaatttgcttgatttaatgaaaaagccagttggaattattca gtcaaaagagataaagaaaattgaaataaagagcagaaacataactagaatcagatctgtacatgtacaaaaaagggctt catttaagagtaagatagacgtcacatccatgaccacaacaggtatcgtgaaatgtgagcatcagttttggagatgtcga aaatgcgtcagtttatcggagccctcggcttggcatcttggcaaaggactttga |
|
Protein
| Protein ID | pfu_aug1.0_43058.1_27021.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_43058.1_27021.t1 MSDNGASVIPPQTFVECGQCKGNVNISWFCKNCPCSLCDTCATAHKTTQQYKSHTVVSRTYTVLRLYGPAKLAEQCHIHP EKEISSYCNDCGIPCCVTCMVNDHKRHEFSTIEDKYLDTEKGLNEYYRQLDTDIRPTLETMEEQARADVKEDDSHVEKVI DDINIFRKDVVQNFNRACDDLIVQVRSFSSKTNEGLKEIETSLKNLEIIKKEIEEKIARGNLNLIKYTPPKMDTLVPKLK GPSKVVPIFEPCRNLLDLMKKPVGIIQSKEIKKIEIKSRNITRIRSVHVQKRASFKSKIDVTSMTTTGIVKCEHQFWRCR KCVSLSEPSAWHLGKGL |
|