Gene
| Gene Model ID | pfu_aug1.0_4321.1_01698 |
|---|---|
| Locus | scaffold4321.1 : 76 ... 27841 : + |
| To GenomeBrowser | scaffold4321.1:76..27841 |
| Genes list of scaffold | scaffold4321.1 |
| Synonym | pfu_aug2.0_64.1_13528 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4321.1_01698.t1 | 2 | 1 | GPS | 426 | 468 | 3.4e-09 | 36.6 | 4.9e-08 | 0.00024 | 21.1 |
| pfu_aug1.0_4321.1_01698.t1 | 2 | 2 | GPS | 631 | 672 | 3.4e-09 | 36.6 | 7.4e-08 | 0.00037 | 20.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4321.1_01698.t1 | gi|156368110|ref|XP_001627539.1| | predicted protein [Nematostella vectensis] | 4.0e-25 |
Transcript
| Transcript ID | pfu_aug1.0_4321.1_01698.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4321.1_01698.t1 atggactcgacttacacagagttgtctgtccctgttacgagatccctggcggataaaccaatcagtgtacaacttctgat gatgtcactgtcacctgaccctggacagccaatcagatttgtagcatctctaaccacatccaactgcagtggaattaaca ttcaggagtacagtaataccctgatatttgagagtgacgtctcattatcagactacgattactcgttgtacctgcctggt aacctaccaaccagtgatatggattcagcagtagaacttgctattcccctggcagaaatgatggaagatgccggtaataa caatacacagaaaatcggagaggtcataaacgatgtcgcttacaacttcctgtcttcatcatcagcagaatttgatcgtg atcattgtcaaatttttgtaatgtatttcagatttgaccgtgaccaggccagtaacatactaagtacagcagtatctatt ttggaatccgcagctaaaacaggcgtgttagcccccaaggttataacagaggctcagagtaaggccttccagctggctgc ccttgtactaggtgtggtggatagtggaagtgggcgagcttcgctcgcaaaggcccttcgggcctttgcagcgagctccg ctcgctataaaacatacattactataggtaacagaaggagaaagagagctgtagatgacagcaatactaaaacatccatg accaaagcagaggctgaatccatactaagtacatacagtgtgacgttttctggacaagcggaggcagacattgccaaacc tgacgctgatgattacctcacggccatagataacatcagaatgggactgtgcgctgaagttgtttatggagaggtcgcca ctgttgcagagtcctccatggaaacagttcgtgttgtcaagtcaactgttgataccatagcaacagaggtcattgatgtg acctgccaaaactgtgcagtgacacagacagtaaagataatgtatggagctagtatccagtctgactacacacagtggaa ctgtacatccacggaaaactgtaacggagcttgctttacttcctctcagctaaataaagatttggttacagcgacctcct cacagcgttttacgatggaccttaccaggcgtagtgatataatctcaataaagatggtgaacccatccacccatgatatt atgacagtagaaaacttgacgtcacctataatgattactgttcctataaatggggatgtaaacgagacagaatacacgtt acaatgtaagagatggagtatagatacatggacagatactggttgtgacagctccacaccctacctcagtaatgatacat attacatacattgttcttgtaactcgctgggaatattcagcgtatttgaaggaactatcatggaggccaccacacaagtt gccatgacaacagatgcagatatggagacagtatccatggtaacatctgaccttgacatgacctctgatcacacagatac aacagaagacagtgatacaacagaagacagactgtgcgctgaggttgtttatggagaggtcgccactgttgcagagtcct ccatggaaacagttcgtgttgtcaagacaactgttgataccatagcaacagaggtcatcgacgtgacctgccaaaactgt gcagtgacacagacagcaaagctaaataaagatttggttacagcgacctcctcacagcgttttacaatggaccttaccag gcgtagtgatataatctcaataaagatggttaacccatccacccatgatattatgacggtagaaaacctgacgtcaccta taatgattactgttcctataaatggggatgtaaatgagacagaatacatgttacaatgtaagagatggagtgtagataca tggacagatactggatgtgacagctccacaccttacctcagtaatgatacatactacgtacattgttcttgtaactcact gggaatattcagcgtctttgaaggaactatcatggaggccaccacacaagttgccatgacaacaaatgcagatattgaga cagtatccatggtaacatctgaccttgacatgacctctgattacacagatacaacagaagacatgatgacagagaccatg accacatcacccgtggtgaacaccacagtaatgagcaccacactggctaccactacgctggcctccagagtgtcggtacc taaagataccgataaggtgtacatcatgttcaaggtgcacggtgtgtacgacacagtggtagaaaacgacaaggatgcct tcctggagcatctccatagagacctggcaacgtacatgagaatagcggagtcaaggatcaacaatctaaaggttacaaaa gggagcatcataataaattttgagctgctatcccgtacccgtaccacagagctgacactcggtgaggtagtatacatact actacagggagtacagactggcagcctgccactcacagacctgcagggtaacagcctggtactggatatccactccttta tgtggtccattaaccaacttgaaccaccatcagagagcagttctaagatgacggtatatattgtgggcggggctatagga gcgtttgtcctgctggtgttcctaacgggggcattcctctacatcttcaaggtcaaggccggtaaagctcaccaagtatc ccagtcaccacaacctctgtatggacctaacatgcaaggagtagatgtacctcgtccaagtgggaaacagactggagtgg tcggaaactgggtcagaaatgagagtgagactgcagcatcaagttgtagtggtactataaaagtccaggagaaagatgca ccaccaggagatgaggatagtgatccaccaccaagatactctggtaacgtttatatgcactaa |
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Protein
| Protein ID | pfu_aug1.0_4321.1_01698.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4321.1_01698.t1 MDSTYTELSVPVTRSLADKPISVQLLMMSLSPDPGQPIRFVASLTTSNCSGINIQEYSNTLIFESDVSLSDYDYSLYLPG NLPTSDMDSAVELAIPLAEMMEDAGNNNTQKIGEVINDVAYNFLSSSSAEFDRDHCQIFVMYFRFDRDQASNILSTAVSI LESAAKTGVLAPKVITEAQSKAFQLAALVLGVVDSGSGRASLAKALRAFAASSARYKTYITIGNRRRKRAVDDSNTKTSM TKAEAESILSTYSVTFSGQAEADIAKPDADDYLTAIDNIRMGLCAEVVYGEVATVAESSMETVRVVKSTVDTIATEVIDV TCQNCAVTQTVKIMYGASIQSDYTQWNCTSTENCNGACFTSSQLNKDLVTATSSQRFTMDLTRRSDIISIKMVNPSTHDI MTVENLTSPIMITVPINGDVNETEYTLQCKRWSIDTWTDTGCDSSTPYLSNDTYYIHCSCNSLGIFSVFEGTIMEATTQV AMTTDADMETVSMVTSDLDMTSDHTDTTEDSDTTEDRLCAEVVYGEVATVAESSMETVRVVKTTVDTIATEVIDVTCQNC AVTQTAKLNKDLVTATSSQRFTMDLTRRSDIISIKMVNPSTHDIMTVENLTSPIMITVPINGDVNETEYMLQCKRWSVDT WTDTGCDSSTPYLSNDTYYVHCSCNSLGIFSVFEGTIMEATTQVAMTTNADIETVSMVTSDLDMTSDYTDTTEDMMTETM TTSPVVNTTVMSTTLATTTLASRVSVPKDTDKVYIMFKVHGVYDTVVENDKDAFLEHLHRDLATYMRIAESRINNLKVTK GSIIINFELLSRTRTTELTLGEVVYILLQGVQTGSLPLTDLQGNSLVLDIHSFMWSINQLEPPSESSSKMTVYIVGGAIG AFVLLVFLTGAFLYIFKVKAGKAHQVSQSPQPLYGPNMQGVDVPRPSGKQTGVVGNWVRNESETAASSCSGTIKVQEKDA PPGDEDSDPPPRYSGNVYMH |
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