Gene
| Gene Model ID | pfu_aug1.0_4330.1_37850 |
|---|---|
| Locus | scaffold4330.1 : 1 ... 9375 : - |
| To GenomeBrowser | scaffold4330.1:1..9375 |
| Genes list of scaffold | scaffold4330.1 |
| Synonym | pfu_aug2.0_753.1_11160 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4330.1_37850.t1 | 3 | 1 | Ank_2 | 33 | 95 | 2.5e-36 | 123.9 | 3.8e-09 | 1.1e-05 | 25.6 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 2 | Ank_2 | 41 | 130 | 2.5e-36 | 123.9 | 5.6e-15 | 1.7e-11 | 44.3 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 1 | Ank_4 | 42 | 87 | 3.2e-13 | 49.7 | 2.3e-06 | 0.0068 | 16.8 |
| pfu_aug1.0_4330.1_37850.t1 | 2 | 1 | Ank_5 | 53 | 107 | 1.5e-18 | 66.3 | 1.5e-12 | 4.4e-09 | 36.3 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 1 | Ank | 67 | 97 | 1.1e-19 | 69.1 | 1.1e-08 | 3.4e-05 | 23.4 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 1 | Ank_3 | 67 | 95 | 1.9e-16 | 58.5 | 8.3e-08 | 0.00024 | 21.0 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 2 | Ank_4 | 67 | 119 | 3.2e-13 | 49.7 | 4.8e-10 | 1.4e-06 | 28.6 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 3 | Ank_2 | 72 | 163 | 2.5e-36 | 123.9 | 2.0e-21 | 5.9e-18 | 65.0 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 2 | Ank | 100 | 130 | 1.1e-19 | 69.1 | 9.5e-07 | 0.0028 | 17.3 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 2 | Ank_3 | 100 | 124 | 1.9e-16 | 58.5 | 7.5e-05 | 0.22 | 11.8 |
| pfu_aug1.0_4330.1_37850.t1 | 2 | 2 | Ank_5 | 119 | 165 | 1.5e-18 | 66.3 | 5.8e-10 | 1.7e-06 | 28.0 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 3 | Ank_3 | 132 | 161 | 1.9e-16 | 58.5 | 7.3e-08 | 0.00022 | 21.1 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 3 | Ank | 133 | 164 | 1.1e-19 | 69.1 | 1.5e-09 | 4.4e-06 | 26.2 |
| pfu_aug1.0_4330.1_37850.t1 | 3 | 3 | Ank_4 | 133 | 164 | 3.2e-13 | 49.7 | 7.3e-06 | 0.022 | 15.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4330.1_37850.t1 | gi|160774315|gb|AAI55173.1| | LOC794796 protein [Danio rerio] | 2.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_4330.1_37850.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4330.1_37850.t1 atgtcaaaagttgtggcgaaggccaaaggcaaatcaaaaataagcaatttgctcaagttccgtaaaagtaccacagacct ttcagaatggaacaagaatgatgagaagttactgaagagtatagaacttggtgatgttgataaagtttcttcactcctac agaaaaagacaatagtccctaataaacttggacctaaaggactctctgtcttccatgtggcgtgtgccacaggtcagatt acaatcgtagacttattactacagtacggagcggagccgaacatccttaccattcaaggttgttcagcactgcaattagc atcaagtaatggctggccccaagttgttcataagctagtacagataggtgctgttatagaccataaagatgggaataact taacggcacttcaccatgcgtgtatggactccaaatcagaatgtgttctggttctactcaggagcggagctgacctcaat ataaaggacaagtctgtcactgccatagctgccattcatgattttggctttcatttgattgagcatccaccttattcaac tgatcttgctccatcagactttcatctgttcccaaaactgaaagcagctgtttctggcaccaactttcagtctgatgatg tcatacataaagtgaatgactttctgaccagtcaagataaggagttctttaaagtgggggaggttgtggctttcgttatg gactcctcaccaaaaccagagaagaaaccgacacttcttgaacagacacaaacacagaacaaaacacaattatcagtaga aaatcaatcatcacaaaaagccttggaacaacaaagaactctggaggcatataaggtacaaaaacgttga |
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Protein
| Protein ID | pfu_aug1.0_4330.1_37850.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4330.1_37850.t1 MSKVVAKAKGKSKISNLLKFRKSTTDLSEWNKNDEKLLKSIELGDVDKVSSLLQKKTIVPNKLGPKGLSVFHVACATGQI TIVDLLLQYGAEPNILTIQGCSALQLASSNGWPQVVHKLVQIGAVIDHKDGNNLTALHHACMDSKSECVLVLLRSGADLN IKDKSVTAIAAIHDFGFHLIEHPPYSTDLAPSDFHLFPKLKAAVSGTNFQSDDVIHKVNDFLTSQDKEFFKVGEVVAFVM DSSPKPEKKPTLLEQTQTQNKTQLSVENQSSQKALEQQRTLEAYKVQKR |
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