Gene
| Gene Model ID | pfu_aug1.0_43424.1_19890 |
|---|---|
| Locus | scaffold43424.1 : 1 ... 3976 : + |
| To GenomeBrowser | scaffold43424.1:1..3976 |
| Genes list of scaffold | scaffold43424.1 |
| Synonym | pfu_aug2.0_1925.1_18600 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_43424.1_19890.t1 | 1 | 1 | Plant_tran | 51 | 231 | 2.4e-13 | 49.9 | 4.3e-16 | 1.6e-12 | 47.2 |
| pfu_aug1.0_43424.1_19890.t1 | 1 | 1 | DDE_Tnp_1 | 69 | 200 | 4.1e-07 | 29.7 | 1.3e-08 | 4.8e-05 | 23.0 |
| pfu_aug1.0_43424.1_19890.t1 | 1 | 1 | DDE_Tnp_4 | 72 | 224 | 1.4e-33 | 115.6 | 5.1e-37 | 1.9e-33 | 115.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_43424.1_19890.t1 | gi|291233883|ref|XP_002736880.1| | PREDICTED: putative nuclease HARBI1-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_43424.1_19890.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_43424.1_19890.t1 gtatttagcatcacaagaaaccatctacgagttgagtgaccgcttcgggttaacagaacactgtttcttaaagtgcaaga aacaagttgttaaagctgtgattgatacacttttaaagaagtgcatcaagtggccagaagttacagactttccagacatc gcaagacaattcaatgaaatgggagcatacaacttcccaaatatcattagagccattgatggctgtcatattcagataga ggcaccgttacagaattcaaattcatactacaacaggaagaaatatttctcaattatattacaggctgtgtgcaaaaatg acttgcaattcattgatgttaatgttggattgccaggtagggtgcatgatgcaaaagttctcaagacttctagcctgtgg gaagctggatttgcgaaaactgcttatagacgttttcacttattaggagatgctgcataccccctgaaacagtggctttt taccccataccgagacacaggacatgtgaaccgtcaacaactacgttataacttgcatctgtcttcaaaaagacaggtca tcgagcgtgcttttgcactgttgaaaagtcgcttcaggaggctaaagtatctgaatattaagtcagaacttgaaatgtgt agaaccatcatttgtgcttgcatacttcacaatgtatgcatattagagaatgacaacttactgggcgatatcatagatgt agactctgacggtgaagatggtggacaaggtagtggcaatacagcagtgattcaaatgatgctcagggatcaatga |
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Protein
| Protein ID | pfu_aug1.0_43424.1_19890.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_43424.1_19890.t1 YLASQETIYELSDRFGLTEHCFLKCKKQVVKAVIDTLLKKCIKWPEVTDFPDIARQFNEMGAYNFPNIIRAIDGCHIQIE APLQNSNSYYNRKKYFSIILQAVCKNDLQFIDVNVGLPGRVHDAKVLKTSSLWEAGFAKTAYRRFHLLGDAAYPLKQWLF TPYRDTGHVNRQQLRYNLHLSSKRQVIERAFALLKSRFRRLKYLNIKSELEMCRTIICACILHNVCILENDNLLGDIIDV DSDGEDGGQGSGNTAVIQMMLRDQ |
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