Gene
| Gene Model ID | pfu_aug1.0_43467.1_55902 |
|---|---|
| Locus | scaffold43467.1 : 1 ... 4817 : - |
| To GenomeBrowser | scaffold43467.1:1..4817 |
| Genes list of scaffold | scaffold43467.1 |
| Synonym | pfu_aug2.0_550.1_00876 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_43467.1_55902.t1 | 3 | 1 | Otopetrin | 51 | 81 | 3.1e-16 | 59.4 | 0.22 | 1100.0 | -1.7 |
| pfu_aug1.0_43467.1_55902.t1 | 3 | 2 | Otopetrin | 154 | 167 | 3.1e-16 | 59.4 | 0.4 | 2000.0 | -2.6 |
| pfu_aug1.0_43467.1_55902.t1 | 3 | 3 | Otopetrin | 193 | 254 | 3.1e-16 | 59.4 | 6.4e-20 | 3.1e-16 | 59.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_43467.1_55902.t1 | gi|242020867|ref|XP_002430872.1| | conserved hypothetical protein [Pediculus humanus corporis] | 3.0e-26 |
Transcript
| Transcript ID | pfu_aug1.0_43467.1_55902.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_43467.1_55902.t1 tcctcgaggagaaggaatctgacaaagctatccaaatgatatcagacgaaatgtacgtggacgagggaagtaggatggcc ttgaccttcgataaagcagacgccaactatattgggagcaatgacgtcgacgaggccaggaaaagagaatacaacaaaag attattaagggacaacctatcagccagtatgagcggtttgtacggcatcttcttggcagttctgggtacagtcctaccaa taacagaaacatttgctggtgaacctaatccatacatgtttgagctttactacgtgtacttgtatacagtcagtctcgtt ttcatcgtatacgtcaacgtatgtgttcttcaatggagacccataaaatccaagttcctgactagattattctgtgggat cagacagattgcatccagagtgttcgataggataagaaagtgtcgacggaccgaagggaacgaaacaacggaagagacca gtcaagaagacgaagaaaatacacgactaaaagatgacgaagaggagagtgttcgagtggtgcatacgtcagcacgacgt cataccggtagctttccattgagactaggagctgtcggatttgggatcgccagtatgattcacagtggtttatacttcgg acagtattttcagacgagagatggatcatcaatatgtcataattctgtccatgccatcaaacctttcatgcatcttctct ttacatttgtacaactttacttcattttcatgaattcaaaggtaaggccggccttggtggtgaatatatcttag |
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Protein
| Protein ID | pfu_aug1.0_43467.1_55902.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_43467.1_55902.t1 LEEKESDKAIQMISDEMYVDEGSRMALTFDKADANYIGSNDVDEARKREYNKRLLRDNLSASMSGLYGIFLAVLGTVLPI TETFAGEPNPYMFELYYVYLYTVSLVFIVYVNVCVLQWRPIKSKFLTRLFCGIRQIASRVFDRIRKCRRTEGNETTEETS QEDEENTRLKDDEEESVRVVHTSARRHTGSFPLRLGAVGFGIASMIHSGLYFGQYFQTRDGSSICHNSVHAIKPFMHLLF TFVQLYFIFMNSKVRPALVVNIS |
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