Gene
| Gene Model ID | pfu_aug1.0_4348.1_16369 |
|---|---|
| Locus | scaffold4348.1 : 47175 ... 61365 : - |
| To GenomeBrowser | scaffold4348.1:47175..61365 |
| Genes list of scaffold | scaffold4348.1 |
| Synonym | pfu_aug2.0_819.1_31186 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4348.1_16369.t1 | 1 | 1 | AA_permease_2 | 50 | 230 | 8.5e-29 | 100.3 | 1.4e-32 | 1.0e-28 | 100.0 |
| pfu_aug1.0_4348.1_16369.t1 | 1 | 1 | AA_permease | 51 | 231 | 6.5e-19 | 67.6 | 1.1e-22 | 8.1e-19 | 67.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4348.1_16369.t1 | gi|326927339|ref|XP_003209850.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4348.1_16369.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4348.1_16369.t1 atgtatgactcaacaaattacgatcccagcgaagttgagttacggtctgccacgtttatgtcccgtttagctgcggctgc tttagggcagatgcacgttttatcaagttttgcggcaaaacgcggtcagtcgattcacgaaaaaggcgcactatgttact cagaaataggcacgttgataaagagatctggtggagaatacgcgtacatccgtgaagcgtacggtaacgtactggctttc ctgtacgcctggacctccgtcatcgtaatacgtacgtcatccatggccatcatctgcctgacgtttggcgaatacatgac gacatttttcccgtactgcggagcaccacagattcctaaaaagcttgtagctgcagttgctctggtgactctaggagtga tcaatggttacagcaccaaacttgcaggtagaacccaagtattctttaccgttgtcaagctggcggcacttgccataata gccattggcggaatcgtgagattagctcaaggtcatacatcaaatcttcaggaaggttttaaaggcacaataagtaaccc atctacggtagcattgggattctacaacgcactgtgggcatatgacggatggaataacttgaatgttgttacagaggaaa tcatagatccggcaaaaaatttaccaagagcaaacatccttgcagttttatggtga |
|
Protein
| Protein ID | pfu_aug1.0_4348.1_16369.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4348.1_16369.t1 MYDSTNYDPSEVELRSATFMSRLAAAALGQMHVLSSFAAKRGQSIHEKGALCYSEIGTLIKRSGGEYAYIREAYGNVLAF LYAWTSVIVIRTSSMAIICLTFGEYMTTFFPYCGAPQIPKKLVAAVALVTLGVINGYSTKLAGRTQVFFTVVKLAALAII AIGGIVRLAQGHTSNLQEGFKGTISNPSTVALGFYNALWAYDGWNNLNVVTEEIIDPAKNLPRANILAVLW |
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