Gene
Gene Model ID | pfu_aug1.0_4365.1_37858 |
---|---|
Locus | scaffold4365.1 : 3466 ... 25174 : + |
To GenomeBrowser | scaffold4365.1:3466..25174 |
Genes list of scaffold | scaffold4365.1 |
Synonym | pfu_aug2.0_2346.1_22033 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4365.1_37858.t1 | 2 | 1 | Xpo1 | 85 | 132 | 5.2e-06 | 26.4 | 6.0e-06 | 0.045 | 13.6 |
pfu_aug1.0_4365.1_37858.t1 | 2 | 2 | Xpo1 | 206 | 270 | 5.2e-06 | 26.4 | 8.8e-05 | 0.65 | 9.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4365.1_37858.t1 | gi|260783008|ref|XP_002586571.1| | hypothetical protein BRAFLDRAFT_131385 [Branchiostoma floridae] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_4365.1_37858.t1 |
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Definition | - |
>pfu_aug1.0_4365.1_37858.t1 atggaaagtgaaccgtctttagagacggtgcaccaagcacttcaagccctgtataacaatccagatattcacggcaaaga aaaagcctctgtttggcttggagaattgcaaagatcagtctatgcttggcaagtatcagaccatctgcttaggcttaacc aaagtctggagtccagttactttgctgctcagaccatgagaacaaaaatccagtatgcttttcatgagctcccagctgct tcacataatacacattgtgtagaaagccaggattgtgatgagaaaacccaagtaaaagtcttccgttgtttgggtagctg gttctctctgggcgttatacctgatacagctatagtcagcagtaaattgttaatggcaccgtttcaggcactggaaggta tcccatcccatacagatgattttggggagttcagattacgagtgtcagagttgatcaaagatgttatatttattgttggt tcttcctcttgttttacccaaatgtttgaaaatttaaaatcccagtcagacagtacatcttgggatgtgacagaagcttc tctttttataatgacagcagttgcgaaaaatattttacctgatgagaatgagatagttccgcaggttgttaaagctattt tatcgatacctaacactgtacatatagctgttagacataccagtatagctttatttggagaacttagtgaatggatagag gttcacccagactatttagatcccatattgcagtttttgttagctggtctacaggaacctaagctttctactgctgcagc caatgccttacagagtatatctacgacgtgccggactcagatggtggaacattttggtgggctggtccagatcgtatctg ctatggatacgtttagtctgtcaaatgaggctgccattggtctgttaaagggtgctgcaacaattttgggtaaattaccc caggataaagtcgctgatggtttacgtcagctgtgttcatttcaacttacccctctaaataaggctttttgtgtgccaac attcaaagttctagaagaacacaatggattacggaaccatccagatactgttgatgatttgtttaggttatgtttaagct gtgtatgggaacttttcgttagaagtattatcatcggagattatgtaggggagacataa |
Protein
Protein ID | pfu_aug1.0_4365.1_37858.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4365.1_37858.t1 MESEPSLETVHQALQALYNNPDIHGKEKASVWLGELQRSVYAWQVSDHLLRLNQSLESSYFAAQTMRTKIQYAFHELPAA SHNTHCVESQDCDEKTQVKVFRCLGSWFSLGVIPDTAIVSSKLLMAPFQALEGIPSHTDDFGEFRLRVSELIKDVIFIVG SSSCFTQMFENLKSQSDSTSWDVTEASLFIMTAVAKNILPDENEIVPQVVKAILSIPNTVHIAVRHTSIALFGELSEWIE VHPDYLDPILQFLLAGLQEPKLSTAAANALQSISTTCRTQMVEHFGGLVQIVSAMDTFSLSNEAAIGLLKGAATILGKLP QDKVADGLRQLCSFQLTPLNKAFCVPTFKVLEEHNGLRNHPDTVDDLFRLCLSCVWELFVRSIIIGDYVGET |