Gene
| Gene Model ID | pfu_aug1.0_4365.1_37860 |
|---|---|
| Locus | scaffold4365.1 : 47752 ... 59265 : - |
| To GenomeBrowser | scaffold4365.1:47752..59265 |
| Genes list of scaffold | scaffold4365.1 |
| Synonym | pfu_aug2.0_6085.1_19489 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | transmembrane receptor |
| Description | BLASTP top hit to ADM73175.1 [Crassostrea gigas] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4365.1_37860.t1 | 1 | 1 | 7TM_GPCR_Srx | 43 | 166 | 2.9e-06 | 26.6 | 1.0e-09 | 3.7e-06 | 26.2 |
| pfu_aug1.0_4365.1_37860.t1 | 1 | 1 | 7tm_1 | 51 | 190 | 1.3e-22 | 80.2 | 4.4e-26 | 1.6e-22 | 79.8 |
Transcript
| Transcript ID | pfu_aug1.0_4365.1_37860.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4365.1_37860.t1 atgaattattcaactgaacgaaatttccagttagaaggacatgggtcttccgagatcgtttttgggcgtcatcagttcct gatagagacccccgctattgcagtccctggacttgttatactggtgctggcttcagttgtaggaacattcggaaatttac ttatcttattttccctgtgtacaacaaaatctttgcaaaccatagaggctattttcatcgcaaatttggcaatatccgac atgtacgttacagtattagcagatcccatgagcattgtcgcaaaacttgaaggcgaggagttctttgatatggttccagg actatgtcgggctatagcttatggctgtaccatatcctgtgtgaattccctatgcaccattgcttgtatgagtttcaaca gatacatctacatctgccattacaaatactaccatacaatattcaagaagagcacatgtgttgtaatgtgtgcatgtctg tatggcgttgggacaactttggttttgctaaaccttgctggtattggcgaccattcatttgatcggaaaagcctggagtg tatttgggaccgcnaataccttggcaaaagcttctacagaatcggctttttgattagctatgagaaggatgactcaattt aa |
|
Protein
| Protein ID | pfu_aug1.0_4365.1_37860.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4365.1_37860.t1 MNYSTERNFQLEGHGSSEIVFGRHQFLIETPAIAVPGLVILVLASVVGTFGNLLILFSLCTTKSLQTIEAIFIANLAISD MYVTVLADPMSIVAKLEGEEFFDMVPGLCRAIAYGCTISCVNSLCTIACMSFNRYIYICHYKYYHTIFKKSTCVVMCACL YGVGTTLVLLNLAGIGDHSFDRKSLECIWDRXYLGKSFYRIGFLISYEKDDSI |
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