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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4375.1_59507
Locus scaffold4375.1 : 186 ... 13837 : +
To GenomeBrowser scaffold4375.1:186..13837
Genes list of scaffold scaffold4375.1
Synonym pfu_aug2.0_1334.1_14973

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4375.1_59507.t1 1 1 FAD_binding_1 12 94 1.1e-15 57.7 2.2e-19 1.6e-15 57.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4375.1_59507.t1 gi|325296979|ref|NP_001191505.1| nitric oxide synthase 2 [Aplysia californica] 5.0e-17

Transcript
Transcript IDpfu_aug1.0_4375.1_59507.t1
Definition-
>pfu_aug1.0_4375.1_59507.t1
atgctcaattcggttctctattgtctcagtaaactgcacaatcggacggtactttcttgtgaacttgttcaaagaaaaca
actgcaatcaaagacatcagatcggcaaacaatcctcgtcaagctagatacttcagggagatcagaaatgagatattcac
ccggggaccacgttgcaatttatcccgccaattctggcaagattgttgacgggatcattaaccatttgaaggatccatca
gccgcagataaacttatcaaagtctttgtctcccaaacaaggaaaggacagaatgttggaaacacaaaacgctggggtga
tatggacatttactttggatgtcgacaatcaactgttgataacatctatggagctgagcttgatgtttgtaaaaatgata
gggtcttcagcgaagtcaatatagctctgagcagagaaccaggagtcaaaaagacgaacaattcattccatcaagatata
tttggggtaaacttaaaatcaaaggaagatcaagcgaggcaaattatgtccaaactaaatgcagattgcacaaatgagtt
aaagaagatcctgacgataatttcaacagcactcacaatagagcacaaaattgagcatcgacggacccctagcaagctag
atgtgggaccagttgtgacaaacgtcattaagatgggagaactaggcgaccacaatgacgctctgaaatactgcaacaac
gaaaaaagtttatttctcaagtggaatgacctatctaacagtgttataattgccgaaataagacgtctcacgaaggagag
gaagaccaattatgtatatttctggatcgataactgtcaatacggtaatggaacatggatattttcgtcaaacaacaatt
gtattaatggatatgttgaattcaatgttaggccttctggaacattaaggacatcatgtagccagtctgactgcggacat
ccttttcacagtctatgtaaaactaaagttaacaacagactcgagtcaatttttcatgaccttgttgttgccaaagaact
ttctgatctccatgaaaaatatatcattgttcctgctgacaaagcggcaaacaattttactttcaatatgtacatggaga
caataaccggtgttgcatgcaatcaggatacgctgactcatcccgggcaccgcgtcttacttcgtaattttattcattcc
gatgttcgcaaccgatcctttggaaaatctaattattttgccttgccttctcgacgttga

Protein
Protein IDpfu_aug1.0_4375.1_59507.t1
Definition-
>pfu_aug1.0_4375.1_59507.t1
MLNSVLYCLSKLHNRTVLSCELVQRKQLQSKTSDRQTILVKLDTSGRSEMRYSPGDHVAIYPANSGKIVDGIINHLKDPS
AADKLIKVFVSQTRKGQNVGNTKRWGDMDIYFGCRQSTVDNIYGAELDVCKNDRVFSEVNIALSREPGVKKTNNSFHQDI
FGVNLKSKEDQARQIMSKLNADCTNELKKILTIISTALTIEHKIEHRRTPSKLDVGPVVTNVIKMGELGDHNDALKYCNN
EKSLFLKWNDLSNSVIIAEIRRLTKERKTNYVYFWIDNCQYGNGTWIFSSNNNCINGYVEFNVRPSGTLRTSCSQSDCGH
PFHSLCKTKVNNRLESIFHDLVVAKELSDLHEKYIIVPADKAANNFTFNMYMETITGVACNQDTLTHPGHRVLLRNFIHS
DVRNRSFGKSNYFALPSRR

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