Gene
| Gene Model ID | pfu_aug1.0_438.1_07537 |
|---|---|
| Locus | scaffold438.1 : 20524 ... 25415 : - |
| To GenomeBrowser | scaffold438.1:20524..25415 |
| Genes list of scaffold | scaffold438.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_438.1_07537.t1 | 1 | 1 | TIMP | 24 | 212 | 6.1e-34 | 117.1 | 1.1e-37 | 7.8e-34 | 116.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_438.1_07537.t1 | gi|50299474|gb|AAT73610.1| | 2.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_438.1_07537.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_438.1_07537.t1 atgaatccaatacattcccaattggcagctttgtttttattactagtctccgtggtaaaggatacgtgggcgtgtacctg cttccccacccatgtgcaacaacactactgtatggctgatgtcgttttagttgcaacgatcaaagatgtggaggaaatat ttcagaacagtttagtcaaagccccaaatccactaatgccagacgacccttatgcacggatgcccgtggaaagaaaatac aaaataagggtccaccgattcttcaagggaaatgacaagttagataacattggaaaagctttgaaatacattcatacgtc gggatcaggagccgcttgtggagtcatcttacagaagggcaaaacctacattatatcagcacgcattcaaaggagagaag tatggacaagcatgtgtaattggatacaagactacaaaactatcaaacgtcaccagatgaaaggactcaaattccattac aagagaaattgtcattgtgaggtatcatggtgtcaggccagttattgtagcgatccaggaccgcgagaatgtcgatgggt tccaaggatgtggaatcaagattgtttccaggatcacggtttctgtatgattaataataaaaatcagtgtcaatggaaaa gaaataaaaaactaaagcagtgtctgagatacaataacattgtattcccgtggaaaaccgtacgaaaagcacctacacga gaggtatcaccagattccgagaacgaaagttcgaatgaaaggagccctgggtttggacttggtcctgaggagttcaatcc agccctagaggatagaagtccggggtatggggcccacagtcctggttataatagtcccggatctaatagccccggatatg gaggacgtgtcaatgcaagggagagattaccaagcagagtcgtagaaccttga |
|
Protein
| Protein ID | pfu_aug1.0_438.1_07537.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_438.1_07537.t1 MNPIHSQLAALFLLLVSVVKDTWACTCFPTHVQQHYCMADVVLVATIKDVEEIFQNSLVKAPNPLMPDDPYARMPVERKY KIRVHRFFKGNDKLDNIGKALKYIHTSGSGAACGVILQKGKTYIISARIQRREVWTSMCNWIQDYKTIKRHQMKGLKFHY KRNCHCEVSWCQASYCSDPGPRECRWVPRMWNQDCFQDHGFCMINNKNQCQWKRNKKLKQCLRYNNIVFPWKTVRKAPTR EVSPDSENESSNERSPGFGLGPEEFNPALEDRSPGYGAHSPGYNSPGSNSPGYGGRVNARERLPSRVVEP |
|