Gene
| Gene Model ID | pfu_aug1.0_438.1_07541 |
|---|---|
| Locus | scaffold438.1 : 68946 ... 71918 : + |
| To GenomeBrowser | scaffold438.1:68946..71918 |
| Genes list of scaffold | scaffold438.1 |
| Synonym | pfu_aug2.0_371.1_04069 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_438.1_07541.t1 | 3 | 1 | Mito_carr | 18 | 69 | 3.69999e-41 | 138.7 | 1.3e-13 | 1.9e-09 | 37.0 |
| pfu_aug1.0_438.1_07541.t1 | 3 | 2 | Mito_carr | 77 | 170 | 3.69999e-41 | 138.7 | 1.5e-25 | 2.2e-21 | 75.3 |
| pfu_aug1.0_438.1_07541.t1 | 3 | 3 | Mito_carr | 181 | 210 | 3.69999e-41 | 138.7 | 1.5e-09 | 2.2e-05 | 24.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_438.1_07541.t1 | gi|291242486|ref|XP_002741139.1| | PREDICTED: mitochondrial substrate carrier family protein ucpB-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_438.1_07541.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_438.1_07541.t1 atgcagcttgaaaatgaactggtgaagcaaaaaggacttgatgtaataaggaatagatactacgacggcttcctgaaagg gggactgcagatagtccgtgatgagggtgtcctgggactttacaaaggactgctaccgtctctgatgagggagggaagtt acagtactataagaatgggggcctacgaaccccttaaagtcttgtttggggcaacagatccagctcacacacctttatgg aagaaaatatgtgcaggtgccatttcaggtacaattggaagctcaatagcaactcccacagatttagtaaaagtccgtat gcaggctcaagggaaactagtagagggtcaagttcctcggtatagaagcacttttgctgctttctcggagatattttaca ccgagggcatccgtggtctgtacgtcggcattggacctactgttaaacgagcagcggtactcactgcaactcagattcca agctacgaccatgctaaacacacaatactgaacgctgggttgatgtcagagggaccaagacttcacgtggtgtgctctat gattgctgggttcatgactgcactaactacctctcctgttgacgtcatcaaaactagaataatgaaccagcaacgtgatc attgttaa |
|
Protein
| Protein ID | pfu_aug1.0_438.1_07541.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_438.1_07541.t1 MQLENELVKQKGLDVIRNRYYDGFLKGGLQIVRDEGVLGLYKGLLPSLMREGSYSTIRMGAYEPLKVLFGATDPAHTPLW KKICAGAISGTIGSSIATPTDLVKVRMQAQGKLVEGQVPRYRSTFAAFSEIFYTEGIRGLYVGIGPTVKRAAVLTATQIP SYDHAKHTILNAGLMSEGPRLHVVCSMIAGFMTALTTSPVDVIKTRIMNQQRDHC |
|